RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ZNF614Q8N883 585 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 OR5AK3PQ8NH89 298 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 XAGE5Q8WWM1 108 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 YME1L1Q96TA2 773 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 MOV10Q9HCE1 1003 aaKnown RBP15.11■□□□□ 0.01
PTPRU-201ENST00000345512 ABCD2Q9UBJ2 740 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 WASH4PA8MWX3 477 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 M0QZQ0 153 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 ZW10O43264 779 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SERPINB7O75635 380 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 ZNF865P0CJ78 1059 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-201ENST00000345512 GJA5P36382 358 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 POLR2IP36954 125 aaKnown RBP15.11■□□□□ 0.01
PTPRU-201ENST00000345512 BUD31P41223 144 aaPredicted RBP15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SCN1BQ07699 218 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SPCS2Q15005 226 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 ZNF544Q6NX49 715 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 NOXRED1Q6NXP6 359 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 DCP2Q8IU60 420 aaKnown RBP15.11■□□□□ 0.01
PTPRU-201ENST00000345512 MDGA1Q8NFP4 955 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 ZNF607Q96SK3 696 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 MMP27Q9H306 513 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SERHL2Q9H4I8 314 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SERHLQ9NQF3 203 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 NECTIN3Q9NQS3 549 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 TRPS1Q9UHF7 1281 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 SARDHQ9UL12 918 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 TMED5Q9Y3A6 229 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 OARD1Q9Y530 152 aa15.11■□□□□ 0.01
PTPRU-201ENST00000345512 WNT9AO14904 365 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 PCDH7O60245 1069 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 DCST1Q5T197 706 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 RAET1GQ6H3X3 334 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 NDNFQ8TB73 568 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ZFP90Q8TF47 636 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SLC38A4Q969I6 547 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 CMTM7Q96FZ5 175 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 POLR2J2Q9GZM3 115 aaKnown RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SLC9A8Q9Y2E8 581 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ACOX3O15254 700 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ATG13O75143 517 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ERAL1O75616 437 aaKnown RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 IFNGR2P38484 337 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SLC15A1P46059 708 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 OR1E2P47887 323 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 HNMTP50135 292 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 GALNT7Q86SF2 657 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 NXPE1Q8N323 547 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 QRFPRQ96P65 431 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 OSBPL10Q9BXB5 764 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SEMA3GQ9NS98 782 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SACM1LQ9NTJ5 587 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ZNF624Q9P2J8 865 aaPredicted RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 HAT1O14929 419 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 CASKO14936 926 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ELFN1P0C7U0 828 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 GPR1P46091 355 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 NPRL3Q12980 569 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SCARB2Q14108 478 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 TSTQ16762 297 aaKnown RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 TYSND1Q2T9J0 566 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 TMEM53Q6P2H8 277 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 SLC22A17Q8WUG5 538 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 TIFAQ96CG3 184 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 TMCO6Q96DC7 493 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 GPR62Q9BZJ7 368 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 ENPP5Q9UJA9 477 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 CDV3Q9UKY7 258 aaKnown RBP15.1■□□□□ 0.01
PTPRU-201ENST00000345512 PHIPQ8WWQ0 1821 aa15.1■□□□□ 0.01
PTPRU-201ENST00000345512 NEDD8-MDP1E9PL57 170 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 AREL1O15033 823 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 PTX3P26022 381 aaPredicted RBP15.09■□□□□ 0.01
PTPRU-201ENST00000345512 ZDHHC20Q5W0Z9 365 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 OR13F1Q8NGS4 319 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 ZNF558Q96NG5 402 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 COL21A1Q96P44 957 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 MGME1Q9BQP7 344 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 VPS51Q9UID3 782 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 CLCA2Q9UQC9 943 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 UGT2B17O75795 530 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 GBAP04062 536 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 INHBEP58166 350 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 ATAD3BQ5T9A4 648 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 PGBD5Q8N414 524 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 POFUT2Q9Y2G5 429 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
PTPRU-201ENST00000345512 ARNTLO00327 626 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 MUSKO15146 869 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 MPZL2O60487 215 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 TPST2O60704 377 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 LCKP06239 509 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 PCBP2Q15366 365 aaKnown RBP eCLIP15.09■□□□□ 0.012e-9■■■■■ 39.4
PTPRU-201ENST00000345512 TNFAIP8L2Q6P589 184 aaPredicted RBP15.09■□□□□ 0.01
PTPRU-201ENST00000345512 TBPL2Q6SJ96 375 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 USP30Q70CQ3 517 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 TICAM1Q8IUC6 712 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 OR2T11Q8NH01 316 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 COQ7Q99807 217 aa15.09■□□□□ 0.01
PTPRU-201ENST00000345512 SLC35A5Q9BS91 424 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms