RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TFAP2CQ92754 450 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 BCL2L14Q9BZR8 327 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 TNFRSF10DQ9UBN6 386 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 VPS29Q9UBQ0 182 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 ARPC4-TTLL3A0A0A6YYG9 625 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 PDHXO00330 501 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 IRF6O14896 467 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 NSG1P42857 185 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 DSTNP60981 165 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 HSPB3Q12988 150 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 LRRC66Q68CR7 880 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 LRRC70Q7Z2Q7 622 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 ZNF615Q8N8J6 731 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 ACBD6Q9BR61 282 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 COMMD4Q9H0A8 199 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 PIGVQ9NUD9 493 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 SLC27A5Q9Y2P5 690 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 PCDHGB7Q9Y5F8 929 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 MYH7BA7E2Y1 1941 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 IFT172Q9UG01 1749 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 CPSF4LA6NMK7 179 aaKnown RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 MANBAO00462 879 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 AXIN1O15169 862 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 NIPSNAP2O75323 286 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 ZNF157P51786 506 aaPredicted RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 GBX2P52951 348 aaPredicted RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 LAPTM4AQ15012 233 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 SIRPB2Q5JXA9 342 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 SMYD5Q6GMV2 418 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 RAB12Q6IQ22 244 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 HAGHLQ6PII5 290 aaPredicted RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 ZNF782Q6ZMW2 699 aaPredicted RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 SPERTQ8NA61 448 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 RFT1Q96AA3 541 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 CDKN2AIPNLQ96HQ2 116 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 FCRL3Q96P31 734 aaPredicted RBP17.62■□□□□ 0.41
SMC4-201ENST00000344722 BRD7Q9NPI1 651 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 CPQQ9Y646 472 aa17.62■□□□□ 0.41
SMC4-201ENST00000344722 A0A1W2PRB8 838 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 RYKP34925 604 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 CRISP3P54108 245 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 LILRA4P59901 499 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 PSMA6P60900 246 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 NCS1P62166 190 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 OLIG2Q13516 323 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 NDUFA9Q16795 377 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 OR10T2Q8NGX3 314 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 C1orf216Q8TAB5 229 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 TRIM36Q9NQ86 728 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 ADARB2Q9NS39 739 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 PPIEQ9UNP9 301 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 EXOSC1Q9Y3B2 195 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 PCDH7O60245 1069 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 MRPS14O60783 128 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 OPN1SWP03999 348 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 AP1S1P61966 158 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 MPPE1Q53F39 396 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 BLOC1S3Q6QNY0 202 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 RNF31Q96EP0 1072 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 IFT27Q9BW83 186 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 TREM1Q9NP99 234 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 C14orf105Q9NVL8 296 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 CDC7O00311 574 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 PRODHO43272 600 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 CBX2Q14781 532 aaPredicted RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 PTGR1Q14914 329 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 FNDC3BQ53EP0 1204 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 DEDD2Q8WXF8 326 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 ALPK1Q96QP1 1244 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 TRIM2Q9C040 744 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 ERVK13-1Q9NX77 482 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 KIAA1522Q9P206 1035 aaPredicted RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 MSCO60682 206 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 HCN1O60741 890 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 SLC25A12O75746 678 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 C1RP00736 705 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 NR4A2P43354 598 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 RPP38P78345 283 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 PRAMEF17Q5VTA0 474 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 MAP1SQ66K74 1059 aaPredicted RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 MSANTD2Q6P1R3 559 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 QSOX2Q6ZRP7 698 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 PRSS48Q7RTY5 328 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 ZNF598Q86UK7 904 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 OR10Q1Q8NGQ4 319 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 SLC29A1Q99808 456 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 CST11Q9H112 138 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 OR51V1Q9H2C8 321 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 NMUR1Q9HB89 426 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 MRPL17Q9NRX2 175 aaKnown RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 CUEDC1Q9NWM3 386 aaPredicted RBP17.61■□□□□ 0.41
SMC4-201ENST00000344722 PCDH10Q9P2E7 1040 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
SMC4-201ENST00000344722 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 A0A1W2PQ67 120 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 SLC35G4P0C7Q5 338 aa17.6■□□□□ 0.41
SMC4-201ENST00000344722 EN1Q05925 392 aaPredicted RBP17.6■□□□□ 0.41
SMC4-201ENST00000344722 TAF10Q12962 218 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms