RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ZNF773Q6PK81 442 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 RBM23Q86U06 439 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ZDHHC21Q8IVQ6 265 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 SVOPLQ8N434 492 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 TRAM1L1Q8N609 369 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 DDHD1Q8NEL9 900 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 COG8Q96MW5 612 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 OR4K3Q96R72 315 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 BARD1Q99728 777 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 SGK2Q9HBY8 427 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 STOX2Q9P2F5 926 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ABCG2Q9UNQ0 655 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ERVK-11Q9UQG0 969 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 A0A1W2PPW3 197 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 KPNA3O00505 521 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 RECQL5O94762 991 aaPredicted RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 SLCO2B1O94956 709 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 CYP4B1P13584 511 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 PRPS1L1P21108 318 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 AGXTP21549 392 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ACSM2AQ08AH3 577 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 C16orf72Q14CZ0 275 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 DUOXA1Q1HG43 343 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 CTU2Q2VPK5 515 aaKnown RBP14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 TTC23Q5W5X9 447 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ACSM2BQ68CK6 577 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 FAM9CQ8IZT9 166 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 BTN2A2Q8WVV5 523 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 SH3KBP1Q96B97 665 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 AP2M1Q96CW1 435 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 DTNBP1Q96EV8 351 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 ZSCAN5AQ9BUG6 496 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 VPS4AQ9UN37 437 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 AP3M1Q9Y2T2 418 aa14.42□□□□□ -0.1
VIPAS39-202ENST00000343765 VCANP13611 3396 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 MAGEB17A8MXT2 336 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 YY2O15391 372 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 EPN2O95208 641 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 LAMP1P11279 417 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 SYN1P17600 705 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 PTPN2P17706 415 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 PRPH2P23942 346 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 HKDC1Q2TB90 917 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 TCEAL5Q5H9L2 206 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 TMEM220Q6QAJ8 160 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 VTCN1Q7Z7D3 282 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 OR5K1Q8NHB7 308 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 DNAJB8Q8NHS0 232 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 CLP1Q92989 425 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 GLYATL1Q969I3 302 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 AASDHPPTQ9NRN7 309 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 BTBD3Q9Y2F9 522 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 ATG13O75143 517 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 MATN1P21941 496 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 TMEM115Q12893 351 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 ZNF77Q15935 545 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 FGD3Q5JSP0 725 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 BROXQ5VW32 411 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 LIPJQ5W064 366 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 GRASPQ7Z6J2 395 aaPredicted RBP14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 C1orf52Q8N6N3 182 aaKnown RBP14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 BPIFB6Q8NFQ5 453 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 WDR20Q8TBZ3 569 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 PKP4Q99569 1192 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 ETAA1Q9NY74 926 aa14.41□□□□□ -0.1
VIPAS39-202ENST00000343765 PSIP1O75475 530 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 AP2A2O94973 939 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 EPCAMP16422 314 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CRHBPP24387 322 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CTNNB1P35222 781 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 GALK1P51570 392 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CASP9P55211 416 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 WNT3P56703 355 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 DCDC1P59894 354 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CD47Q08722 323 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 DCTN2Q13561 401 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 ZNF805Q5CZA5 627 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 C1orf53Q5VUE5 145 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 GPR65Q8IYL9 337 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 ARL10Q8N8L6 244 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CHDHQ8NE62 594 aaPredicted RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 YTHDF1Q9BYJ9 559 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CRISPLD2Q9H0B8 497 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 MAGIXQ9H6Y5 334 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 LOC100130705A0A1B0GUX0 176 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 PTGES3LE9PB15 166 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 PLK4O00444 970 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CATP04040 527 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 GBAP04062 536 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 NTRK1P04629 796 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 ABCB1P08183 1280 aaPredicted RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 IMPA1P29218 277 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 AQP1P29972 269 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 NUP107P57740 925 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 MESP2Q0VG99 397 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 BIRC2Q13490 618 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 NEK10Q6ZWH5 1172 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 PARS2Q7L3T8 475 aaKnown RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 TMPRSS11BQ86T26 416 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 OR52E4Q8NGH9 312 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms