RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 CHCHD6Q9BRQ6 235 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 EMILIN2Q9BXX0 1053 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 SNX6Q9UNH7 406 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 M0R129 80 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 WNT9AO14904 365 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 ALPIP09923 528 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 HSMCR30P0CW71 290 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 CAMK2GQ13555 558 aaPredicted RBP21.73■■□□□ 1.07
TRIM28-202ENST00000341753 ARHGEF7Q14155 803 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 LRIF1Q5T3J3 769 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 RNF175Q8N4F7 328 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 CENPOQ9BU64 300 aa21.73■■□□□ 1.07
TRIM28-202ENST00000341753 FAM126AQ9BYI3 521 aaPredicted RBP21.73■■□□□ 1.07
TRIM28-202ENST00000341753 A8MV72 311 aaPredicted RBP21.72■■□□□ 1.07
TRIM28-202ENST00000341753 SLC25A14O95258 325 aaPredicted RBP21.72■■□□□ 1.07
TRIM28-202ENST00000341753 CR2P20023 1033 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 AQP1P29972 269 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 S100A5P33763 92 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 ZXDBP98169 803 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 FAM26DQ5JW98 314 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 TRIM46Q7Z4K8 759 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 SIGLEC11Q96RL6 698 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 ERVW-1Q9UQF0 538 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 PCDHGA6Q9Y5G7 932 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 GREB1Q4ZG55 1949 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 SAGE2PA6NJ88 616 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 TAF4O00268 1085 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 TLL1O43897 1013 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 SGSHP51688 502 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 DUSP4Q13115 394 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 TAS1R1Q7RTX1 841 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 EBPLQ9BY08 206 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 REEP1Q9H902 201 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 TAS2R16Q9NYV7 291 aa21.72■■□□□ 1.07
TRIM28-202ENST00000341753 AFF4Q9UHB7 1163 aaKnown RBP21.72■■□□□ 1.07
TRIM28-202ENST00000341753 AGRPO00253 132 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 SCAMP3O14828 347 aaKnown RBP21.71■■□□□ 1.07
TRIM28-202ENST00000341753 VNN2O95498 520 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 EIF2S1P05198 315 aaKnown RBP21.71■■□□□ 1.07
TRIM28-202ENST00000341753 NFE2Q16621 373 aaPredicted RBP21.71■■□□□ 1.07
TRIM28-202ENST00000341753 GATAD2AQ86YP4 633 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 PCSK9Q8NBP7 692 aaKnown RBP21.71■■□□□ 1.07
TRIM28-202ENST00000341753 C17orf50Q8WW18 174 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 C8orf48Q96LL4 319 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 TTPALQ9BTX7 342 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 CLPBQ9H078 707 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 LATS2Q9NRM7 1088 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 GPR83Q9NYM4 423 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 KMOO15229 486 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 TUBA1BP68363 451 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 PNCKQ6P2M8 343 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 TUBA1AQ71U36 451 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 C16orf59Q7L2K0 433 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 SERPINA9Q86WD7 417 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 CDC26Q8NHZ8 85 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 IPCEF1Q8WWN9 437 aaPredicted RBP21.71■■□□□ 1.07
TRIM28-202ENST00000341753 GPR63Q9BZJ6 419 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 ROGDIQ9GZN7 287 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 PCDHB9Q9Y5E1 797 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 SNX8Q9Y5X2 465 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 AP3D1O14617 1153 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 PTTG1O95997 202 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 ENGP17813 658 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 IL1RNP18510 177 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 RTP2Q5QGT7 225 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 USP43Q70EL4 1123 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 GALNT13Q8IUC8 556 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 AMER2Q8N7J2 671 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 SELENOMQ8WWX9 145 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 RAD18Q9NS91 495 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 OARD1Q9Y530 152 aa21.71■■□□□ 1.07
TRIM28-202ENST00000341753 ANKRD34BA5PLL1 514 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 KRT87PA6NCN2 255 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 HAT1O14929 419 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 MFN2O95140 757 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 KRT75O95678 551 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 STSP08842 583 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 EPB42P16452 691 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 HOXB9P17482 250 aaPredicted RBP21.7■■□□□ 1.06
TRIM28-202ENST00000341753 CLDN8P56748 225 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 PRSS55Q6UWB4 352 aaPredicted RBP21.7■■□□□ 1.06
TRIM28-202ENST00000341753 ZNF621Q6ZSS3 439 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 ERVK13-1Q9NX77 482 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 A8MX80 341 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 IDH3BO43837 385 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 AOC2O75106 756 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 IGLV3-27P01718 113 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 PTPN2P17706 415 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 SDC1P18827 310 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 CD9P21926 228 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 KDELR2P33947 212 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 IDH2P48735 452 aaKnown RBP21.7■■□□□ 1.06
TRIM28-202ENST00000341753 NDUFA5Q16718 116 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 RNF180Q86T96 592 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 OR6K2Q8NGY2 324 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 APIPQ96GX9 242 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 APOLD1Q96LR9 279 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 KCNS3Q9BQ31 491 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 ADGRE3Q9BY15 652 aa21.7■■□□□ 1.06
TRIM28-202ENST00000341753 MAGEH1Q9H213 219 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms