RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 GRK3P35626 688 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 VSX2P58304 361 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-202ENST00000340477 FAM214AQ32MH5 1076 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 TEX35Q5T0J7 233 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 LCTLQ6UWM7 567 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 SBSNQ6UWP8 590 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 CCDC91Q7Z6B0 441 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 PAQR7Q86WK9 346 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 LRRC56Q8IYG6 542 aaPredicted RBP18.39■□□□□ 0.53
SYNE4-202ENST00000340477 SLC38A9Q8NBW4 561 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 ARHGAP9Q9BRR9 750 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 CHST8Q9H2A9 424 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 NDOR1Q9UHB4 597 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 PADI2Q9Y2J8 665 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 OARD1Q9Y530 152 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 PCDHGA6Q9Y5G7 932 aa18.39■□□□□ 0.53
SYNE4-202ENST00000340477 ZFYVE26Q68DK2 2539 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 A0A087WUV0 522 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 EIF4E1BA6NMX2 242 aaKnown RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 CDC7O00311 574 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 HCRTR1O43613 425 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 FAM155BO75949 473 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 S100BP04271 92 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 EIF2S1P05198 315 aaKnown RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 CD63P08962 238 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 PRKAR1AP10644 381 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 PIM1P11309 404 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 WT1P19544 449 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 PTPN4P29074 926 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 HNMTP50135 292 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 CDKL1Q00532 357 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 CDC20Q12834 499 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 TSNQ15631 228 aaKnown RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 ZKSCAN8Q15776 578 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 PTCHD3Q3KNS1 767 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 CRTC2Q53ET0 693 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 C1orf189Q5VU69 101 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 C16orf46Q6P387 395 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 FAM199XQ6PEV8 388 aaPredicted RBP18.38■□□□□ 0.53
SYNE4-202ENST00000340477 TBC1D19Q8N5T2 526 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 ANKRD49Q8WVL7 239 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 NLNQ9BYT8 704 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 ACTL8Q9H568 366 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 TMEM184CQ9NVA4 438 aa18.38■□□□□ 0.53
SYNE4-202ENST00000340477 A0A1B0GX78 115 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 H3BMH7 237 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 TXNDC9O14530 226 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 RAB40ALP0C0E4 278 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 ALAS2P22557 587 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 DCDP81605 110 aaKnown RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 RELAQ04206 551 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 PPP1R3AQ16821 1122 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 WASHC2DQ5SRD0 308 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 ZNF425Q6IV72 752 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 ZNF517Q6ZMY9 492 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 TTLL10Q6ZVT0 673 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 TRMT10CQ7L0Y3 403 aaKnown RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 SYVN1Q86TM6 617 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 TCAIMQ8N3R3 496 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 SGPP1Q9BX95 441 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 FUT8Q9BYC5 575 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 CUTCQ9NTM9 273 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 CUEDC1Q9NWM3 386 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 IFT80Q9P2H3 777 aaPredicted RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 DHCR7Q9UBM7 475 aaKnown RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 TLK1Q9UKI8 766 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 FARSAQ9Y285 508 aaKnown RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 DYRK1BQ9Y463 629 aa18.37■□□□□ 0.53
SYNE4-202ENST00000340477 MRPS18BQ9Y676 258 aaKnown RBP18.37■□□□□ 0.53
SYNE4-202ENST00000340477 A0A087X1B8 175 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 H7BY64 318 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 TERTO14746 1132 aaKnown RBP18.36■□□□□ 0.53
SYNE4-202ENST00000340477 DSCR3O14972 297 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CREG1O75629 220 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 F8A1P23610 371 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 MSH2P43246 934 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 SERPINB8P50452 374 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 SERPINB9P50453 376 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 RPS15AP62244 130 aaKnown RBP18.36■□□□□ 0.53
SYNE4-202ENST00000340477 YBX1P67809 324 aaKnown RBP18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CYP4F2P78329 520 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CSHL1Q14406 222 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 NCF4Q15080 339 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 MROH9Q5TGP6 573 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 FRMPD2BQ6IN97 320 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CMC1Q7Z7K0 106 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 GPSM1Q86YR5 675 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CSNK1A1LQ8N752 337 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 ENDOVQ8N8Q3 282 aaKnown RBP18.36■□□□□ 0.53
SYNE4-202ENST00000340477 OR56A3Q8NH54 315 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CABS1Q96KC9 395 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 ZNF285Q96NJ3 590 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 PRAP1Q96NZ9 151 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 GBP5Q96PP8 586 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 DHRS4Q9BTZ2 278 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 CNOT10Q9H9A5 744 aaKnown RBP18.36■□□□□ 0.53
SYNE4-202ENST00000340477 NMRAL1Q9HBL8 299 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 IKZF3Q9UKT9 509 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 RNF112Q9ULX5 631 aa18.36■□□□□ 0.53
SYNE4-202ENST00000340477 ACOT9Q9Y305 439 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms