RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 KRT87PA6NCN2 255 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PABPN1LA6NDY0 278 aaKnown RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 TP73O15350 636 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 KLHL41O60662 606 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 CTSVO60911 334 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 SYF2O95926 243 aaKnown RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 F7P08709 466 aaPredicted RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 ALAS2P22557 587 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 GABRB3P28472 473 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 RPL21P46778 160 aaKnown RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 VSX2P58304 361 aaPredicted RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 IL2P60568 153 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 MGAT5Q09328 741 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PDIA2Q13087 525 aaKnown RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 MLIPQ5VWP3 458 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PRMT9Q6P2P2 845 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PIWIL4Q7Z3Z4 852 aaKnown RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 HPS6Q86YV9 775 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 EEF1AKMT1Q8WVE0 214 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PTERQ96BW5 349 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 MVB12AQ96EY5 273 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 ACAT2Q9BWD1 397 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 TRIM31Q9BZY9 425 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC26A1Q9H2B4 701 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PARVBQ9HBI1 364 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 PLAC1Q9HBJ0 212 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 CCDC177Q9NQR7 707 aaPredicted RBP12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 TAC3Q9UHF0 121 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 TLK1Q9UKI8 766 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 VWA7Q9Y334 891 aa12.76□□□□□ -0.37
SIRPB3P-201ENST00000340424 A0A0J9YVX5 310 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 HYKKA2RU49 373 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 C3orf80F5H4A9 247 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 PEX12O00623 359 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 EIF3HO15372 352 aaKnown RBP eCLIP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 CEACAM4O75871 244 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 CTSBP07858 339 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ENO2P09104 434 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 HIST1H2AGP0C0S8 130 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 HIST1H2ADP20671 130 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ITGAXP20702 1163 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 FDXRP22570 491 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 IMPA1P29218 277 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 CASRP41180 1078 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 CDKN2DP55273 166 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 AP1S2P56377 157 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 NFKB2Q00653 900 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 TIAL1Q01085 375 aaKnown RBP eCLIP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 CAV1Q03135 178 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 KLRB1Q12918 225 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 TSTA3Q13630 321 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 MUM1Q2TAK8 710 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 WASHC2DQ5SRD0 308 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 GARNL3Q5VVW2 1013 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF425Q6IV72 752 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 PAQR3Q6TCH7 311 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 SUSD1Q6UWL2 747 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 OVCH1Q7RTY7 1134 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF572Q7Z3I7 529 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 PAQR7Q86WK9 346 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 PARP9Q8IXQ6 854 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 GPATCH11Q8N954 259 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 FBXO36Q8NEA4 188 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 RERGQ96A58 199 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 LINGO1Q96FE5 620 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 VPS50Q96JG6 964 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 HIST1H2AHQ96KK5 128 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 FER1L6-AS2Q96M78 137 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 HIST1H2AJQ99878 128 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 WDR83Q9BRX9 315 aaKnown RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 H2AFJQ9BTM1 129 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 TRIM54Q9BYV2 358 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 L2HGDHQ9H9P8 463 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC6A20Q9NP91 592 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF71Q9NQZ8 489 aaPredicted RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 MOCS1Q9NZB8 636 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 TP53TG5Q9Y2B4 290 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 SNX24Q9Y343 169 aa12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 UTP11Q9Y3A2 253 aaKnown RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 PTRH2Q9Y3E5 179 aaKnown RBP12.75□□□□□ -0.37
SIRPB3P-201ENST00000340424 FER1L5A0AVI2 2057 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PRPF4O43172 522 aaKnown RBP eCLIP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PGDP52209 483 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 HP1BP3Q5SSJ5 553 aaPredicted RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 HECTD2Q5U5R9 776 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 FRMPD2BQ6IN97 320 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 FBXO42Q6P3S6 717 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 TRMT10BQ6PF06 316 aaKnown RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 ASB18Q6ZVZ8 466 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 CYS1Q717R9 158 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 MRGPREQ86SM8 312 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 ANKMY2Q8IV38 441 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 LRRC56Q8IYG6 542 aaPredicted RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZBED8Q8IZ13 594 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms