RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PRKAR2AP13861 404 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 LHCGRP22888 699 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 PPIBP23284 216 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 OR12D2P58182 307 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 ADAM8P78325 824 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 BTBD16Q32M84 506 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 LIPKQ5VXJ0 399 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 FBXL22Q6P050 247 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 MED27Q6P2C8 311 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 AQP11Q8NBQ7 271 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 OR5J2Q8NH18 312 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 DDX1Q92499 740 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLCO2A1Q92959 643 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 UTP4Q969X6 686 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 HSH2DQ96JZ2 352 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 LMLNQ96KR4 655 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 C8orf48Q96LL4 319 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 GAL3ST4Q96RP7 486 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 FUZQ9BT04 418 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 SLC22A4Q9H015 551 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 MRPL15Q9P015 296 aaKnown RBP8.48□□□□□ -1.05
RTN3-202ENST00000339997 ICE1Q9Y2F5 2266 aa8.48□□□□□ -1.05
RTN3-202ENST00000339997 TRAV19A0A0A6YYK7 116 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 C5orf51A6NDU8 294 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PCDH7O60245 1069 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 KLK1P06870 262 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PABPC4LP0CB38 370 aaKnown RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 CELP19835 753 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 NDST2P52849 883 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 RPA4Q13156 261 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PMS2P3Q13401 168 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 SUSD1Q6UWL2 747 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CCBE1Q6UXH8 406 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 HSDL2Q6YN16 418 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 ELMOD2Q8IZ81 293 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 OR2L5Q8NG80 312 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CSGALNACT1Q8TDX6 532 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PIK3R3Q92569 461 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 UFD1Q92890 307 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 GAL3ST3Q96A11 431 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 KLRG1Q96E93 195 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 NTPCRQ9BSD7 190 aaKnown RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 ST6GALNAC4Q9H4F1 302 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CERS4Q9HA82 394 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CCDC177Q9NQR7 707 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 ZNF69Q9UC07 566 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 MGAT4AQ9UM21 535 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CFL2Q9Y281 166 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 A0A1B0GUL6 1792 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 A0A1W2PP18 115 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 MATN4O95460 622 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 C8BP07358 591 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 YES1P07947 543 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PAX3P23760 479 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 VAMP1P23763 118 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 SCARB2Q14108 478 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 OGFRL1Q5TC84 451 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 CEP97Q8IW35 865 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 FNDC8Q8TC99 324 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 AUTS2Q8WXX7 1259 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 RERGQ96A58 199 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 SLC35A5Q9BS91 424 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 ITPAQ9BY32 194 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 WDR6Q9NNW5 1121 aaKnown RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 NUDT4Q9NZJ9 180 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 STOX2Q9P2F5 926 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 ABCG2Q9UNQ0 655 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 TJP1Q07157 1748 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 ABCA3Q99758 1704 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 TRBC2A0A5B9 178 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 HAS3O00219 553 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 MITFO75030 526 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 CLDN7O95471 211 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PCCBP05166 539 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 GNAO1P09471 354 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CBLP22681 906 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 MAGEA12P43365 314 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 CLCN4P51793 760 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PGDP52209 483 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 OR4D2P58180 307 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 RAB8AP61006 207 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 VLDLRP98155 873 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 KCNC4Q03721 635 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 FPGSQ05932 587 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 ST3GAL4Q11206 333 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 SLC10A2Q12908 348 aaPredicted RBP8.47□□□□□ -1.05
RTN3-202ENST00000339997 LSAMPQ13449 338 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 HYAL4Q2M3T9 481 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 FAAH2Q6GMR7 532 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 PYHIN1Q6K0P9 492 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 MBOAT1Q6ZNC8 495 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 OAFQ86UD1 273 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 SPERTQ8NA61 448 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 NFKBIDQ8NI38 313 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 KCTD7Q96MP8 289 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 TTPALQ9BTX7 342 aa8.47□□□□□ -1.05
RTN3-202ENST00000339997 RACGAP1Q9H0H5 632 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms