RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ACADSP16219 412 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 HRH2P25021 359 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 TRIM23P36406 574 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 ADPRHP54922 357 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 RPS13P62277 151 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 RAE1P78406 368 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 MAPKAPK3Q16644 382 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 PYCR3Q53H96 274 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 MTX3Q5HYI7 312 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 OGFRL1Q5TC84 451 aaPredicted RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 THEMIS2Q5TEJ8 643 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 CACHD1Q5VU97 1274 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 OR4F3Q6IEY1 312 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 CHRDL2Q6WN34 429 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF551Q7Z340 670 aaPredicted RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 DTWD1Q8N5C7 304 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 DPP10Q8N608 796 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 C1orf52Q8N6N3 182 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 JPH3Q8WXH2 748 aaPredicted RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 RAB7BQ96AH8 199 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 LINC00615Q96LM1 132 aaPredicted RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 KCTD14Q9BQ13 255 aaPredicted RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 SORBS1Q9BX66 1292 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC17A9Q9BYT1 436 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 ZCCHC2Q9C0B9 1178 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 XKR8Q9H6D3 395 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 WDR26Q9H7D7 661 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 KCNK12Q9HB15 430 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 GEMIN8Q9NWZ8 242 aaKnown RBP7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 VPS29Q9UBQ0 182 aa7.15□□□□□ -1.27
SRFBP1-201ENST00000339397 GRXCR2A6NFK2 248 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ANHXE9PGG2 379 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CASQ2O14958 399 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 VEGFDO43915 354 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 STATHP02808 62 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ZCCHC18P0CG32 403 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TRAP1Q12931 704 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CLCA4Q14CN2 919 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MLF2Q15773 248 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LIPJQ5W064 366 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 METRNLQ641Q3 311 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MMP21Q8N119 569 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SLC44A3Q8N4M1 653 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 FAM86B1Q8N7N1 296 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 OR2T34Q8NGX1 318 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 OR2T3Q8NH03 318 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TSPEARQ8WU66 669 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PPWD1Q96BP3 646 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C11orf24Q96F05 449 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LRGUKQ96M69 825 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF583Q96ND8 569 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SEPHS2Q99611 448 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CIB1Q99828 191 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 THUMPD3Q9BV44 507 aaKnown RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TEX101Q9BY14 249 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SPATA6Q9NWH7 488 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CUEDC1Q9NWM3 386 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 EPS15L1Q9UBC2 864 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 UTS2RQ9UKP6 389 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 KCNE2Q9Y6J6 123 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C17orf113A0A1B0GUU1 675 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 FEZF1A0PJY2 475 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C7orf72A4D263 438 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PDLIM1O00151 329 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ADH1BP00325 375 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CEACAM5P06731 702 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CDH1P12830 882 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PTPN6P29350 595 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 IGFALSP35858 605 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TNFRSF4P43489 277 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PNLIPRP1P54315 467 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CASP9P55211 416 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CLDN8P56748 225 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MC1RQ01726 317 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SGCGQ13326 291 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 SLBPQ14493 270 aaKnown RBP eCLIP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 C16orf72Q14CZ0 275 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CYP51A1Q16850 503 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 UGT8Q16880 541 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 COQ5Q5HYK3 327 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ZNF776Q68DI1 518 aaPredicted RBP7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 GCNT7Q6ZNI0 430 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 NUDT18Q6ZVK8 323 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 RD3Q7Z3Z2 195 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 LRRTM4Q86VH4 590 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 TICAM1Q8IUC6 712 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 PLD3Q8IV08 490 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 RIMKLAQ8IXN7 391 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CLECL1Q8IZS7 167 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ICA1LQ8NDH6 482 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CCL4L1Q8NHW4 92 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 RPLP0P6Q8NHW5 317 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 HM13Q8TCT9 377 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 CMTM7Q96FZ5 175 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MRGPRX1Q96LB2 322 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 ANKRD27Q96NW4 1050 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 MENTQ9BUN1 341 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 DPEP2Q9H4A9 486 aa7.14□□□□□ -1.27
SRFBP1-201ENST00000339397 COQ10BQ9H8M1 238 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms