RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 MXD3Q9BW11 206 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 TDRD1Q9BXT4 1180 aaKnown RBP1.85□□□□□ -2.11
XRCC4-202ENST00000338635 MAK16Q9BXY0 300 aaKnown RBP1.85□□□□□ -2.11
XRCC4-202ENST00000338635 EDEM3Q9BZQ6 932 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 SHARPINQ9H0F6 387 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 TBC1D17Q9HA65 648 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 CHMP1AQ9HD42 196 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-202ENST00000338635 ZNF701Q9NV72 531 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-202ENST00000338635 WSB2Q9NYS7 404 aaPredicted RBP1.85□□□□□ -2.11
XRCC4-202ENST00000338635 HACL1Q9UJ83 578 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 SNX5Q9Y5X3 404 aa1.85□□□□□ -2.11
XRCC4-202ENST00000338635 AGAP14A8MT82 685 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 CDRT15L2A8MXV6 281 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 LRCH4O75427 683 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 BEST1O76090 585 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 DDHD2O94830 711 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 WDPCPO95876 746 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 KRT6AP02538 564 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 KRT6BP04259 564 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 PTMAP06454 111 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 ADRB2P07550 413 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 IGHV4-31P0DP07 118 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 MUTP22033 750 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 OXTRP30559 389 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 ETV5P41161 510 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 EIF2DP41214 584 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 TSFMP43897 325 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 KRT6CP48668 564 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 IFI35P80217 286 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 GCNT1Q02742 428 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 CXCL9Q07325 125 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 KRT33BQ14525 404 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 MTF1Q14872 753 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 DUSP28Q4G0W2 176 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 SPDYCQ5MJ68 293 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 RPUSD3Q6P087 351 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 TMEM207Q6UWW9 146 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 FRRS1Q6ZNA5 592 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 GDPGP1Q6ZNW5 385 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 LDB1Q86U70 411 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 IQCA1Q86XH1 822 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 ADGRF2Q8IZF7 708 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 C17orf53Q8N3J3 647 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 FBXO39Q8N4B4 442 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 ZNF713Q8N859 430 aaPredicted RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 MSANTD4Q8NCY6 345 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 PPFIBP2Q8ND30 876 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 NPRL2Q8WTW4 380 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 IRGQQ8WZA9 623 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 CDHR1Q96JP9 859 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 B3GALT6Q96L58 329 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 PAFAH2Q99487 392 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 NUP85Q9BW27 656 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 MRPL9Q9BYD2 267 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 OR10A4Q9H209 315 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 CPVLQ9H3G5 476 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 TUBB1Q9H4B7 451 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 RABEP2Q9H5N1 569 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 GRPEL1Q9HAV7 217 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 MORF4L1Q9UBU8 362 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 DAPK2Q9UIK4 370 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 TSPAN16Q9UKR8 245 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 ISY1Q9ULR0 285 aaKnown RBP1.84□□□□□ -2.12
XRCC4-202ENST00000338635 STYXL1Q9Y6J8 313 aa1.84□□□□□ -2.12
XRCC4-202ENST00000338635 OR2A25A4D2G3 310 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 ANKRD61A6NGH8 418 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 TRIM64A6NGJ6 449 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 TRIM64BA6NI03 449 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SHISA7A6NL88 538 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 AVILO75366 819 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 ERAL1O75616 437 aaKnown RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SEC24AO95486 1093 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 VTNP04004 478 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SCG2P13521 617 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 ATP6V1B1P15313 513 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 PTPN3P26045 913 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 EEF1DP29692 281 aaKnown RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 HLA-FP30511 346 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 TNNT3P45378 269 aaPredicted RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SLC15A1P46059 708 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 LMAN1P49257 510 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 HNRNPA3P51991 378 aaKnown RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 ZNF415Q09FC8 603 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 ITPRIPL2Q3MIP1 535 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SLC10A5Q5PT55 438 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 BAIAP2L2Q6UXY1 529 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 FAM47EQ6ZV65 393 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 HAUS6Q7Z4H7 955 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 CCDC91Q7Z6B0 441 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 COMMD2Q86X83 199 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 CEP57Q86XR8 500 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 CFAP206Q8IYR0 622 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 EID3Q8N140 333 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 KCTD6Q8NC69 237 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 NPEPL1Q8NDH3 523 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SAT2Q96F10 170 aaPredicted RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 JAKMIP1Q96N16 626 aaKnown RBP1.83□□□□□ -2.12
XRCC4-202ENST00000338635 CDRT15Q96T59 188 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 KCNK15Q9H427 330 aa1.83□□□□□ -2.12
XRCC4-202ENST00000338635 SMARCAD1Q9H4L7 1026 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms