RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 TICAM1Q8IUC6 712 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 TXNDC15Q96J42 360 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MTERF1Q99551 399 aaKnown RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 TMED9Q9BVK6 235 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CIPCQ9C0C6 399 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SLC35C2Q9NQQ7 365 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 RAD18Q9NS91 495 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 KNL1Q8NG31 2342 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SMIM28A0A1B0GU29 152 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SOWAHBA6NEL2 793 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SOBPA7XYQ1 873 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SMLR1H3BR10 107 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 M0R233 179 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 FCER2P06734 321 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 BTN1A1Q13410 526 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 Q6ZPB1 254 aaPredicted RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 RNF180Q86T96 592 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 YIPF7Q8N8F6 280 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 MTMR14Q8NCE2 650 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 GANCQ8TET4 914 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 EEF1AKMT1Q8WVE0 214 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 FCRL4Q96PJ5 515 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 NIFKQ9BYG3 293 aaKnown RBP12.91□□□□□ -0.34
COL2A1-201ENST00000337299 GSTO2Q9H4Y5 243 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 HCN2Q9UL51 889 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 ANGPT4Q9Y264 503 aa12.91□□□□□ -0.34
COL2A1-201ENST00000337299 IQCMA0A1B0GVH7 501 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PRG2P13727 222 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PRDX3P30048 256 aaKnown RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 HTR6P50406 440 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SCNN1GP51170 649 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 GRSF1Q12849 480 aaKnown RBP eCLIP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 MFSD10Q14728 455 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PAFAH1B3Q15102 231 aaKnown RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 CATSPEREQ5SY80 951 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.343e-6■□□□□ 9.6
COL2A1-201ENST00000337299 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PDCD10Q9BUL8 212 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 FNDC11Q9BVV2 318 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SDR39U1Q9NRG7 319 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PLCL2Q9UPR0 1127 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SCN11AQ9UI33 1791 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ALX3O95076 343 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 IFNW1P05000 195 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 CYP2A7P20853 494 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 STOMP27105 288 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 STAT5AP42229 794 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 FNTBP49356 437 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 CDK10Q15131 360 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 GPAT3Q53EU6 434 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 IFI44LQ53G44 452 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 RUNDC3AQ59EK9 446 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PRSS48Q7RTY5 328 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF433Q8N7K0 673 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 C9orf43Q8TAL5 461 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 GPR151Q8TDV0 419 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 LPPQ93052 612 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 DPH2Q9BQC3 489 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 NLNQ9BYT8 704 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 OSBPL2Q9H1P3 480 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 HCN3Q9P1Z3 774 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 C5P01031 1676 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 CCNDBP1O95273 360 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ANXA8P13928 327 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 BUD31P41223 144 aaPredicted RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 GRM5P41594 1212 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 TSPAN5P62079 268 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 EMX2Q04743 252 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 INTS6LQ5JSJ4 861 aaKnown RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 DHRS4L2Q6PKH6 230 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ZNF767PQ75MW2 155 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 BEND5Q7L4P6 421 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SPRED1Q7Z699 444 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 NPWQ8N729 165 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 PAPD5Q8NDF8 572 aaKnown RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SLC35B4Q969S0 331 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SLC38A2Q96QD8 506 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 TBX5Q99593 518 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 SPATA9Q9BWV2 254 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 NSUN3Q9H649 340 aaKnown RBP12.9□□□□□ -0.34
COL2A1-201ENST00000337299 RNF121Q9H920 327 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 MGAT4AQ9UM21 535 aa12.9□□□□□ -0.34
COL2A1-201ENST00000337299 ARID1AO14497 2285 aa12.9□□□□□ -0.35
COL2A1-201ENST00000337299 AKAP11Q9UKA4 1901 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 EEDO75530 441 aaKnown RBP12.89□□□□□ -0.35
COL2A1-201ENST00000337299 TNFSF8P32971 234 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 SREBF2Q12772 1141 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 ZFP41Q8N8Y5 198 aa12.89□□□□□ -0.35
COL2A1-201ENST00000337299 GLB1L3Q8NCI6 653 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms