RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CBSP35520 551 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 DMPKQ09013 629 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 PDGFRLQ15198 375 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 LDLRAP1Q5SW96 308 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 NOXRED1Q6NXP6 359 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SATL1Q86VE3 508 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 OR4K1Q8NGD4 311 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 USP7Q93009 1102 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 FBXL20Q96IG2 436 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 TMEM245Q9H330 911 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 INVSQ9Y283 1065 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 GNG14A0A1W2PPG7 69 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SLC5A10A0PJK1 596 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SERPIND1P05546 499 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 ACP5P13686 325 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF23P17027 643 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 ITGB7P26010 798 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 DRD3P35462 400 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 PRLHRP49683 370 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 HUS1BQ8NHY5 278 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 REXO4Q9GZR2 422 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 THG1LQ9NWX6 298 aaKnown RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 GALNT8Q9NY28 637 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 SH3BP4Q9P0V3 963 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 KLHL20Q9Y2M5 609 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 KIF26AQ9ULI4 1882 aaPredicted RBP12.18□□□□□ -0.46
LIMK1-201ENST00000336180 DOCK8Q8NF50 2099 aa12.18□□□□□ -0.46
LIMK1-201ENST00000336180 FEZF1A0PJY2 475 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 A6NHS1 94 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 ASLP04424 464 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 GSTM1P09488 218 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 PRKACGP22612 351 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 TAS2R38P59533 333 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 MYBPC1Q00872 1141 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 GSTM4Q03013 218 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CYP4F3Q08477 520 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 GBX1Q14549 363 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 WSCD2Q2TBF2 565 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 HACD2Q6Y1H2 254 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 OR2T12Q8NG77 320 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 OR14C36Q8NHC7 312 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 STON2Q8WXE9 905 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 NSMCE2Q96MF7 247 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CHID1Q9BWS9 393 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 PREBQ9HCU5 417 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 C5AR2Q9P296 337 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 TMCO1Q9UM00 188 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 SLC27A6Q9Y2P4 619 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 LRRK1Q38SD2 2015 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 NPC1O15118 1278 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 C1orf105O95561 183 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 FUCA1P04066 466 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 LAMP1P11279 417 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 COX7A2P14406 83 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 IL10P22301 178 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 YAP1P46937 504 aaKnown RBP12.17□□□□□ -0.46
LIMK1-201ENST00000336180 GALK1P51570 392 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 PWP1Q13610 501 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 SLBPQ14493 270 aaKnown RBP eCLIP12.17□□□□□ -0.46
LIMK1-201ENST00000336180 PLCL1Q15111 1095 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CYP27C1Q4G0S4 372 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CCDC92Q53HC0 331 aaPredicted RBP12.17□□□□□ -0.46
LIMK1-201ENST00000336180 LRRC70Q7Z2Q7 622 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 ZNF551Q7Z340 670 aaPredicted RBP12.17□□□□□ -0.46
LIMK1-201ENST00000336180 TRIM46Q7Z4K8 759 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 C11orf96Q7Z7L8 435 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 FAM162AQ96A26 154 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 FOPNLQ96NB1 174 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 GRIP2Q9C0E4 1043 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 CLDND1Q9NY35 253 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
LIMK1-201ENST00000336180 H3BQ06 376 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 NUDT7P0C024 238 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ACSM2AQ08AH3 577 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 TRAP1Q12931 704 aaKnown RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 GTF2H3Q13889 308 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 FGL2Q14314 439 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ACSM2BQ68CK6 577 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 UGT2A3Q6UWM9 527 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 WDR48Q8TAF3 677 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 UBTD2Q8WUN7 234 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ANKRD27Q96NW4 1050 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 VCXQ9H320 206 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 RHBDL2Q9NX52 303 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ADGRE2Q9UHX3 823 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 ACSL6Q9UKU0 697 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 CDH7Q9ULB5 785 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 OR52A4PA6NMU1 304 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 NOBOXO60393 691 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 PSIP1O75475 530 aaKnown RBP12.16□□□□□ -0.46
LIMK1-201ENST00000336180 HSD17B1P14061 328 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 AMD1P17707 334 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 PTPN5P54829 565 aa12.16□□□□□ -0.46
LIMK1-201ENST00000336180 POLE2P56282 527 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms