RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ACLYP53396 1101 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 FAM189BP81408 668 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 TOP3AQ13472 1001 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 CDONQ4KMG0 1287 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 RNF175Q8N4F7 328 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 POC5Q8NA72 575 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 DEPDC7Q96QD5 511 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 AMBNQ9NP70 447 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 TMEM161AQ9NX61 479 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 MTRRQ9UBK8 725 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 CAB39Q9Y376 341 aaPredicted RBP16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 TPRKBQ9Y3C4 175 aa16.07■□□□□ 0.16
CDC42EP4-201ENST00000335793 H3BNC9 293 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 TMEM189-UBE2V1I3L0A0 370 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 SEMA3DO95025 777 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 DBTP11182 482 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 RUNDC3AQ59EK9 446 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 UBE2R2Q712K3 238 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 SPATC1Q76KD6 591 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 SNX20Q7Z614 316 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 RHBDF1Q96CC6 855 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 TMEM246Q9BRR3 403 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 P2RY12Q9H244 342 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 DCAF13Q9NV06 445 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 OARD1Q9Y530 152 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 PMF1-BGLAPU3KQ54 211 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 TRIM64A6NGJ6 449 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 HPRP00739 348 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 GNG2P59768 71 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 AQP6Q13520 282 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 ZNF846Q147U1 533 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 ASCC1Q8N9N2 400 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 GALNT6Q8NCL4 622 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 ZNF347Q96SE7 839 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 ATP13A3Q9H7F0 1226 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 KAT8Q9H7Z6 458 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 CRNNQ9UBG3 495 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 EMX1Q04741 257 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 CDK5R2Q13319 367 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 SMN1Q16637 294 aaKnown RBP16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 TMEM236Q5W0B7 351 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 RETSATQ6NUM9 610 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 VTCN1Q7Z7D3 282 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 TSPAN33Q86UF1 283 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 SYT12Q8IV01 421 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 C10orf111Q8N326 155 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 CCDC120Q96HB5 630 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 FKBP14Q9NWM8 211 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 GPRC5BQ9NZH0 403 aa16.06■□□□□ 0.16
CDC42EP4-201ENST00000335793 MTX2O75431 263 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ERN1O75460 977 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 F11P03951 625 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 EIF2S1P05198 315 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 HNF1BP35680 557 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 SERPINB10P48595 397 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ST13P50502 369 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 CASP9P55211 416 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 POU6F2P78424 691 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ELAVL2Q12926 359 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 CXorf57Q6NSI4 855 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 PLEKHG7Q6ZR37 379 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 P3H2Q8IVL5 708 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 MSRB3Q8IXL7 192 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 SETD9Q8NE22 299 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 RDH12Q96NR8 316 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 BARD1Q99728 777 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 EBLN1P0CF75 366 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 COL6A1P12109 1028 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 PTGS2P35354 604 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 CDKN2CP42773 168 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ISL1P61371 349 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 VEPH1Q14D04 833 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 AHSA2Q719I0 299 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ZNF784Q8NCA9 323 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 REXO5Q96IC2 774 aaKnown RBP16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 EMILIN2Q9BXX0 1053 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 ACPTQ9BZG2 426 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 CD84Q9UIB8 345 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 SLC22A14Q9Y267 594 aa16.05■□□□□ 0.16
CDC42EP4-201ENST00000335793 SNTNA6NMZ2 147 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 NUAK1O60285 661 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PGLSO95336 258 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 VNN2O95498 520 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 ATF4P18848 351 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 KIR3DL1P43629 444 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 PAGE2Q7Z2X7 111 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 APCDD1Q8J025 514 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 LSMEM1Q8N8F7 131 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 ARL14EPQ8N8R7 260 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 TTC29Q8NA56 475 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 DPH2Q9BQC3 489 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 SNX6Q9UNH7 406 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 GRXCR2A6NFK2 248 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 GALTP07902 379 aa16.04■□□□□ 0.16
CDC42EP4-201ENST00000335793 COX7A2P14406 83 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms