RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 OOSP2Q86WS3 158 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF610Q8N9Z0 462 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SIDT2Q8NBJ9 832 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ACVR1CQ8NER5 493 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OR4S1Q8NGB4 309 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OR4F15Q8NGB8 312 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OR2L2Q8NH16 312 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SNX29Q8TEQ0 813 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TMA16Q96EY4 203 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 DYDC2Q96IM9 177 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KREMEN1Q96MU8 473 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 PSKH2Q96QS6 385 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 CCT8L2Q96SF2 557 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TM2D3Q9BRN9 247 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TUBGCP2Q9BSJ2 902 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NIF3L1Q9GZT8 377 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 DDX47Q9H0S4 455 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 RWDD1Q9H446 243 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF395Q9H8N7 513 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 NEK6Q9HC98 313 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 TIMMDC1Q9NPL8 285 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 DDX56Q9NY93 547 aaKnown RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 RNF14Q9UBS8 474 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 OSGIN2Q9Y236 505 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 MAGED1Q9Y5V3 778 aaPredicted RBP1.44□□□□□ -2.18
LINC00643-201ENST00000334389 HS3ST3B1Q9Y662 390 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 SLC12A7Q9Y666 1083 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 COLEC10Q9Y6Z7 277 aa1.44□□□□□ -2.18
LINC00643-201ENST00000334389 KALRNO60229 2985 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 A0A0D9SFI3 127 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CCDC69A6NI79 296 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NPIPB8E9PQR5 432 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MAP2K7O14733 419 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NEMFO60524 1076 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NEURL1O76050 574 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FSBPO95073 299 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FTCDO95954 541 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RPN2P04844 631 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NEFLP07196 543 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 F8A1P23610 371 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CCND1P24385 295 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CNTFRP26992 372 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CA5AP35218 305 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 EIF4A3P38919 411 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 GPR143P51810 404 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SLC16A1P53985 500 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ALDH6A1Q02252 535 aaKnown RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SEMG2Q02383 582 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 KDSRQ06136 332 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 IKQ13123 557 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 GPS2Q13227 327 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NMIQ13287 307 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TGIF1Q15583 401 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TMEM249Q2WGJ8 235 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FAM214AQ32MH5 1076 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LGALS9BQ3B8N2 356 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MGAT5BQ3V5L5 792 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MAP9Q49MG5 647 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FIGNQ5HY92 759 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF766Q5HY98 468 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 C20orf194Q5TEA3 1177 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 WSCD1Q658N2 575 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC8EQ6NSJ5 796 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CRIP3Q6Q6R5 217 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 FRRS1Q6ZNA5 592 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TMC3Q7Z5M5 1100 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ZNF227Q86WZ6 799 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CEP97Q8IW35 865 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TBC1D21Q8IYX1 336 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RASGEF1CQ8N431 466 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LRRC71Q8N4P6 559 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TTC9BQ8N6N2 239 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 DNAAF3Q8N9W5 541 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 LMNTD1Q8N9Z9 388 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ST13P5Q8NFI4 369 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 IL17RDQ8NFM7 739 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 OR7G1Q8NGA0 311 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 C8orf46Q8TAG6 207 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 EXT2Q93063 718 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 IQCDQ96DY2 449 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 ZBED6CLQ96FA7 236 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SFXN2Q96NB2 322 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PITX2Q99697 317 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CCL19Q99731 98 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 NT5C1AQ9BXI3 368 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 KLC2Q9H0B6 622 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SHARPINQ9H0F6 387 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SNX25Q9H3E2 840 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RAB18Q9NP72 206 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SAYSD1Q9NPB0 183 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 TRIM36Q9NQ86 728 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 DYRK4Q9NR20 520 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 CTNNAL1Q9UBT7 734 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 SERTAD3Q9UJW9 196 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 RCAN3Q9UKA8 241 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 PACSIN2Q9UNF0 486 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 MAGED2Q9UNF1 606 aaPredicted RBP1.43□□□□□ -2.18
LINC00643-201ENST00000334389 INVSQ9Y283 1065 aa1.43□□□□□ -2.18
LINC00643-201ENST00000334389 YARS2Q9Y2Z4 477 aaKnown RBP1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms