RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MBOAT1Q6ZNC8 495 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 TRMT10CQ7L0Y3 403 aaKnown RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 TBC1D1Q86TI0 1168 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 PAQR7Q86WK9 346 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 C17orf64Q86WR6 236 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 CT55Q8WUE5 264 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 UBXN10Q96LJ8 280 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 ZFYVE21Q9BQ24 234 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 C17orf62Q9BQA9 187 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 SGPP1Q9BX95 441 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 AKIRIN1Q9H9L7 192 aaPredicted RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 ENAMQ9NRM1 1142 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 PCMTD2Q9NV79 361 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 FARSAQ9Y285 508 aaKnown RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 OARD1Q9Y530 152 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 PCDHGA6Q9Y5G7 932 aa13.43□□□□□ -0.26
LIMS1-201ENST00000332345 MDC1Q14676 2089 aaKnown RBP13.43□□□□□ -0.26
LIMS1-201ENST00000332345 IGKV1-8A0A0C4DH67 115 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 NPEPPSL1A6NEC2 478 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 ESPNB1AK53 854 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 H7BY64 318 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 WISP3O95389 354 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 RECKO95980 971 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 CD63P08962 238 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 RAB40ALP0C0E4 278 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 EZRP15311 586 aaKnown RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 NPPBP16860 134 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 WT1P19544 449 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 ALAS2P22557 587 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 PTPN4P29074 926 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 SLC26A3P40879 764 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 MSH2P43246 934 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 DCDP81605 110 aaKnown RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 TSNQ15631 228 aaKnown RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 PPP1R3AQ16821 1122 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 CRTC2Q53ET0 693 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 WASHC2DQ5SRD0 308 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 ZNF425Q6IV72 752 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 LCTLQ6UWM7 567 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 RNF44Q7L0R7 432 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 GPSM1Q86YR5 675 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 SPATA6LQ8N4H0 392 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 TTC29Q8NA56 475 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 OR56A3Q8NH54 315 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 PROKR1Q8TCW9 393 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 SLC44A1Q8WWI5 657 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 RERGQ96A58 199 aaPredicted RBP13.42□□□□□ -0.26
LIMS1-201ENST00000332345 ZNF285Q96NJ3 590 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 PRAP1Q96NZ9 151 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 CATSPER2Q96P56 530 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 EGFL8Q99944 293 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 CHST8Q9H2A9 424 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 NMRAL1Q9HBL8 299 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 IL17BQ9UHF5 180 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 IKZF3Q9UKT9 509 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 ACOT9Q9Y305 439 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 LOC400499M0QZD8 3231 aa13.42□□□□□ -0.26
LIMS1-201ENST00000332345 A0A087X1B8 175 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 FITM1A5D6W6 292 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 C9J4A7 227 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 HAX1O00165 279 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 TXNDC9O14530 226 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 TERTO14746 1132 aaKnown RBP13.41□□□□□ -0.26
LIMS1-201ENST00000332345 CREG1O75629 220 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 EIF2S1P05198 315 aaKnown RBP13.41□□□□□ -0.26
LIMS1-201ENST00000332345 CTSBP07858 339 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 PIM1P11309 404 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-201ENST00000332345 CD1DP15813 335 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 F8A1P23610 371 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 GRK3P35626 688 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 SERPINB9P50453 376 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 PMS2P54278 862 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 CSHL1Q14406 222 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 CDKL4Q5MAI5 379 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 LGSNQ5TDP6 509 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 FRMPD2BQ6IN97 320 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 TAOK1Q7L7X3 1001 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 STAG3L4Q8TBR4 150 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 STARD8Q92502 1023 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 KIAA1191Q96A73 305 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 PYCR2Q96C36 320 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 UBL7Q96S82 380 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-201ENST00000332345 NLNQ9BYT8 704 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 GPN3Q9UHW5 284 aaPredicted RBP13.41□□□□□ -0.26
LIMS1-201ENST00000332345 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 MGAQ8IWI9 3026 aa13.41□□□□□ -0.26
LIMS1-201ENST00000332345 LOC105369274A0A096LPK9 316 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 LOC102723532A0A0G2JNH3 316 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 HYKKA2RU49 373 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 POC1B-GALNT4F8VUJ3 575 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 H0YGG7 62 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 ERVH48-1M5A8F1 160 aa13.4□□□□□ -0.26
LIMS1-201ENST00000332345 NKX2-8O15522 239 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms