RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TIGARQ9NQ88 270 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 FAM50BQ9Y247 325 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 SLC35F4A4IF30 521 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 LDB2O43679 373 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 ACADMP11310 421 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 SLC2A4P14672 509 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 OGNP20774 298 aaKnown RBP23.65■■□□□ 1.38
SOX1-201ENST00000330949 CPN2P22792 545 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 IL32P24001 234 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 CD86P42081 329 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 CYP4F2P78329 520 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 SLC35F1Q5T1Q4 408 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 LINC01465Q8N7H1 131 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 COQ8BQ96D53 544 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 C1QTNF7Q9BXJ2 289 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.65■■□□□ 1.38
SOX1-201ENST00000330949 GPR83Q9NYM4 423 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 VPS26AO75436 327 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 ARHGEF15O94989 841 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 VIPP01282 170 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 PDGFAP04085 211 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 TAF6P49848 677 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 RPL38P63173 70 aaKnown RBP23.65■■□□□ 1.38
SOX1-201ENST00000330949 ACVR1Q04771 509 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 GPR153Q6NV75 609 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 FAM122CQ6P4D5 195 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 KCTD20Q7Z5Y7 419 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 C9orf43Q8TAL5 461 aaPredicted RBP23.65■■□□□ 1.38
SOX1-201ENST00000330949 OR52E6Q96RD3 313 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 CPPED1Q9BRF8 314 aaPredicted RBP23.65■■□□□ 1.38
SOX1-201ENST00000330949 ING3Q9NXR8 418 aa23.65■■□□□ 1.38
SOX1-201ENST00000330949 UBA6A0AVT1 1052 aaPredicted RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 AKR7A2O43488 359 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 PDE9AO76083 593 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 DIRAS1O95057 198 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 STC1P52823 247 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 ITKQ08881 620 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 MAD2L1Q13257 205 aaPredicted RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 SEMA3AQ14563 771 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 SLC27A1Q6PCB7 646 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 LIMS2Q7Z4I7 341 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 OSTM1Q86WC4 334 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 NKAPQ8N5F7 415 aaKnown RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 SREK1IP1Q8N9Q2 155 aaPredicted RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 C11orf54Q9H0W9 315 aaPredicted RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 TMEM245Q9H330 911 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 CATSPERZQ9NTU4 200 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 OSER1Q9NX31 292 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 THUMPD1Q9NXG2 353 aaKnown RBP23.64■■□□□ 1.38
SOX1-201ENST00000330949 STOML2Q9UJZ1 356 aa23.64■■□□□ 1.38
SOX1-201ENST00000330949 CSTF2P33240 577 aaKnown RBP eCLIP23.64■■□□□ 1.37
SOX1-201ENST00000330949 GGT2P36268 569 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 ATN1P54259 1190 aaPredicted RBP23.64■■□□□ 1.37
SOX1-201ENST00000330949 ABHD18Q0P651 414 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 ST3GAL4Q11206 333 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 PRAMEF19Q5SWL8 479 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 REPS1Q96D71 796 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 CD274Q9NZQ7 290 aa23.64■■□□□ 1.37
SOX1-201ENST00000330949 ZNF490Q9ULM2 529 aaPredicted RBP23.64■■□□□ 1.37
SOX1-201ENST00000330949 WARSP23381 471 aaKnown RBP23.63■■□□□ 1.37
SOX1-201ENST00000330949 SNRPD2P62316 118 aaKnown RBP23.63■■□□□ 1.37
SOX1-201ENST00000330949 CSTF3Q12996 717 aaKnown RBP23.63■■□□□ 1.37
SOX1-201ENST00000330949 EFHBQ8N7U6 833 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 TMEM40Q8WWA1 233 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 TLR6Q9Y2C9 796 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 HSPB11Q9Y547 144 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 NYNRINQ9P2P1 1898 aaKnown RBP23.63■■□□□ 1.37
SOX1-201ENST00000330949 SMIM28A0A1B0GU29 152 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 WNT9AO14904 365 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 WDR47O94967 919 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 CRISP3P54108 245 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 RUNX1T1Q06455 604 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 TP53BP2Q13625 1128 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 ZNF605Q86T29 641 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 ENKURQ8TC29 256 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 TMEM80Q96HE8 168 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 SIRT5Q9NXA8 310 aa23.63■■□□□ 1.37
SOX1-201ENST00000330949 BET1O15155 118 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 PSPHP78330 225 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 TSTQ16762 297 aaKnown RBP23.62■■□□□ 1.37
SOX1-201ENST00000330949 SV2CQ496J9 727 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 SIRPB2Q5JXA9 342 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 TAC4Q86UU9 113 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 LAX1Q8IWV1 398 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 TMEM132CQ8N3T6 1108 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 PPTC7Q8NI37 304 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 MGLLQ99685 303 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 NT5MQ9NPB1 228 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.62■■□□□ 1.37
SOX1-201ENST00000330949 ASB1Q9Y576 335 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 HTR7P34969 479 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 GJA5P36382 358 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 RORCP51449 518 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 ARPP19P56211 112 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 ATCAYQ86WG3 371 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 GPSM1Q86YR5 675 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 C10orf111Q8N326 155 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 DNAJB3Q8WWF6 145 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 ZFP42Q96MM3 310 aa23.62■■□□□ 1.37
SOX1-201ENST00000330949 ASPNQ9BXN1 380 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms