RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CDC23Q9UJX2 597 aa12.96□□□□□ -0.33
GTF3C6-201ENST00000329970 FBXL4Q9UKA2 621 aa12.96□□□□□ -0.33
GTF3C6-201ENST00000329970 NBPF19A0A087WUL8 3843 aa12.96□□□□□ -0.34
GTF3C6-201ENST00000329970 SCN2AQ99250 2005 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 DOPEY1Q5JWR5 2465 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 A0A1W2PQ72 361 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 E7ENX8 843 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 TXNDC9O14530 226 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 PRPF4O43172 522 aaKnown RBP eCLIP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 KIF5CO60282 957 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 MED26O95402 600 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 SLC16A8O95907 504 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 EZRP15311 586 aaKnown RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 RPA3P35244 121 aaPredicted RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 OR1D4P47884 311 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 FOXL2P58012 376 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 TAP2Q03519 686 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 OCA2Q04671 838 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 CTBP1Q13363 440 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 RAPSNQ13702 412 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 CRB2Q5IJ48 1285 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 RNASEH2BQ5TBB1 312 aaKnown RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 FHL5Q5TD97 284 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 TMEM151BQ8IW70 566 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 LRRC56Q8IYG6 542 aaPredicted RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ZADH2Q8N4Q0 377 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ARHGEF39Q8N4T4 335 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 GABPB2Q8TAK5 448 aaPredicted RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 STT3BQ8TCJ2 826 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 CD200R1Q8TD46 325 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 PPP4R1Q8TF05 950 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ZNF480Q8WV37 535 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 INPP5DQ92835 1189 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 FAM136AQ96C01 138 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 OR2A5Q96R48 311 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 BARD1Q99728 777 aaKnown RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 MFRPQ9BY79 579 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 FBXO6Q9NRD1 293 aaPredicted RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ZC3H7BQ9UGR2 993 aaKnown RBP12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 FBXO5Q9UKT4 447 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 CDC14AQ9UNH5 594 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
GTF3C6-201ENST00000329970 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 H0YGG7 62 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ZSCAN12O43309 604 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ZBTB14O43829 449 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 NRP2O60462 931 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 TTC4O95801 387 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ZGLP1P0C6A0 271 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ERVK-10P10266 1014 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 PGAM1P18669 254 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 HRH2P25021 359 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ITGA3P26006 1051 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 TERF1P54274 439 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ARF3P61204 181 aaPredicted RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 YBX1P67809 324 aaKnown RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 DSG2Q14126 1118 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 RBBP7Q16576 425 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 KCTD19Q17RG1 926 aaPredicted RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 PLEKHN1Q494U1 663 aaPredicted RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 UGT3A1Q6NUS8 523 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 SUSD1Q6UWL2 747 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 GALNT7Q86SF2 657 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 OR11G2Q8NGC1 345 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 SNRNP40Q96DI7 357 aaKnown RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 GPR21Q99679 349 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 EBNA1BP2Q99848 306 aaKnown RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 NAT9Q9BTE0 207 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 AARSD1Q9BTE6 412 aaKnown RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 ACAT2Q9BWD1 397 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 TGIF2Q9GZN2 237 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 LHPPQ9H008 270 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 SOX17Q9H6I2 414 aaPredicted RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 C20orf96Q9NUD7 363 aaPredicted RBP12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 C14orf105Q9NVL8 296 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
GTF3C6-201ENST00000329970 SVILO95425 2214 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 GOLGA8MH3BSY2 632 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 DNALI1O14645 258 aaPredicted RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 HPP00738 406 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 FBLP22087 321 aaKnown RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 SLC26A3P40879 764 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 KLC1Q07866 573 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 PTK6Q13882 451 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 FAM53BQ14153 422 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 ATG9BQ674R7 924 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 KCNMB4Q86W47 210 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 CNTN4Q8IWV2 1026 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 C2CD4AQ8NCU7 369 aaPredicted RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 WDR77Q9BQA1 342 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms