RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 INTS6Q9UL03 887 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 HTTP42858 3142 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 A0A096LPI6 279 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 A0A1W2PQ45 241 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 A0A1W2PQY0 241 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SUV39H1O43463 412 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CCNDBP1O95273 360 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 PORP16435 677 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 RRM2P31350 389 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 KDELR2P33947 212 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 PREPP48147 710 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 DAB2P98082 770 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 LMAN2Q12907 356 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CLCA4Q14CN2 919 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 INO80DQ53TQ3 878 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 C1orf52Q8N6N3 182 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 DCAF4L2Q8NA75 395 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 COPS4Q9BT78 406 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SLCO3A1Q9UIG8 710 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SCN10AQ9Y5Y9 1956 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 KRBA1A5PL33 1030 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 AREL1O15033 823 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 AXIN1O15169 862 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ANXA4P09525 319 aaPredicted RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 LAMP1P11279 417 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 DAPP51397 102 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 CDH12P55289 794 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SNRPD1P62314 119 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SPIBQ01892 262 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SMARCB1Q12824 385 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 GRSF1Q12849 480 aaKnown RBP eCLIP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 VMACQ2NL98 169 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 GPRC6AQ5T6X5 926 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZNF461Q8TAF7 563 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 RDH12Q96NR8 316 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ACAT2Q9BWD1 397 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 WDR12Q9GZL7 423 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 TPT1P8Q9HAU6 139 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 SGK2Q9HBY8 427 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 ZDHHC3Q9NYG2 299 aa12.51□□□□□ -0.41
HMGCS1-201ENST00000325110 TRIM43BA6NCK2 446 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 EFCAB9A8MZ26 197 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 RGS5O15539 181 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 URODP06132 367 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 HMGA1P17096 107 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 MAGEA10P43363 369 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 RPP38P78345 283 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ADPRMQ3LIE5 342 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ADNP2Q6IQ32 1131 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 NEK5Q6P3R8 708 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CRTC1Q6UUV9 634 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 TMPRSS11BQ86T26 416 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 SLC22A16Q86VW1 577 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CLIP4Q8N3C7 705 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 OR2AP1Q8NGE2 309 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 GTPBP3Q969Y2 492 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 TMEM159Q96B96 161 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 P2RY13Q9BPV8 354 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CHCHD6Q9BRQ6 235 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ADPRHL2Q9NX46 363 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 MBD1Q9UIS9 605 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 OGDHLQ9ULD0 1010 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 FZD4Q9ULV1 537 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DUSP12Q9UNI6 340 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 TET1Q8NFU7 2136 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 NINQ8N4C6 2090 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 FAM220BPB1ANY3 271 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 H7C0S8 307 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 RETP07949 1114 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 C21orf33P30042 268 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DNAJA1P31689 397 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CPTPQ5TA50 214 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 FAR1Q8WVX9 515 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 MUL1Q969V5 352 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 PDLIM5Q96HC4 596 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CCDC115Q96NT0 180 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DOK1Q99704 481 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 B4GALT6Q9UBX8 382 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ATP11BQ9Y2G3 1177 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 AIREO43918 545 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 S100A5P33763 92 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 TRPC1P48995 793 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 PCYT1AP49585 367 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 TPTEP56180 551 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CREMQ03060 361 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 GANABQ14697 944 aaKnown RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 Q6ZVL8 140 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 HEATR4Q86WZ0 1026 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 ABHD8Q96I13 439 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DUSP26Q9BV47 211 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 DCSTAMPQ9H295 470 aa12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 GPN2Q9H9Y4 310 aaPredicted RBP12.5□□□□□ -0.41
HMGCS1-201ENST00000325110 MRPL17Q9NRX2 175 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms