RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	DGCR14	Q96DF8	476 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	TPT1P8	Q9HAU6	139 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ZIM2	Q9NZV7	527 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	RSL24D1	Q9UHA3	163 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ACSL6	Q9UKU0	697 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	N6AMT1	Q9Y5N5	214 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	TPR	P12270	2363 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ZNF860	A6NHJ4	632 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771		H3BSA7	217 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	LSM1	O15116	133 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	NDUFS2	O75306	463 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	KAT7	O95251	611 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ANGPTL1	O95841	491 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	DLGAP3	O95886	979 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	HOXB2	P14652	356 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	PRPS1L1	P21108	318 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ALAS2	P22557	587 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	TLX1	P31314	330 aa	Predicted RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	NUDT6	P53370	316 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	PIGF	Q07326	219 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	HYAL2	Q12891	473 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	CTC1	Q2NKJ3	1217 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	NADK2	Q4G0N4	442 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	CXorf57	Q6NSI4	855 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	NOXRED1	Q6NXP6	359 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	DUS1L	Q6P1R4	473 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	MRPL43	Q8N983	215 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	RERG	Q96A58	199 aa	Predicted RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ART5	Q96L15	291 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	BTBD9	Q96Q07	612 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	ATOH8	Q96SQ7	321 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	MRPS26	Q9BYN8	205 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	FANCE	Q9HB96	536 aa		11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	DNAAF2	Q9NVR5	837 aa	Known RBP	11.49	□□□□□ -0.57
DDR1-223	ENST00000324771	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	FABP3	P05413	133 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	IL7R	P16871	459 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	TYRP1	P17643	537 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	CCR7	P32248	378 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	RPL26	P61254	145 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	RPS26	P62854	115 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	UBXN2B	Q14CS0	331 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	TRIM71	Q2Q1W2	868 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	GCNT6	Q5T4J0	391 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	THAP5	Q7Z6K1	395 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	LRRTM4	Q86VH4	590 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	PDSS2	Q86YH6	399 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	CLECL1	Q8IZS7	167 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	TP53INP1	Q96A56	240 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	FNDC11	Q9BVV2	318 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	RC3H2	Q9HBD1	1191 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	MAT2B	Q9NZL9	334 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ACTR3B	Q9P1U1	418 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	DNMT3B	Q9UBC3	853 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	LHX3	Q9UBR4	397 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	RAB26	Q9ULW5	256 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	OR10H1	Q9Y4A9	318 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	NUMBL	Q9Y6R0	609 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	DOCK1	Q14185	1865 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	PIPSL	A2A3N6	862 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	SNAP29	O95721	258 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	APOA1	P02647	267 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ALDOC	P09972	364 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	RAP2A	P10114	183 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	C6	P13671	934 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ZNF30	P17039	623 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	PDHA2	P29803	388 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ILF3	Q12906	894 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	C1orf61	Q13536	156 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	TLR1	Q15399	786 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ZNF423	Q2M1K9	1284 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	CES4A	Q5XG92	561 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	OR8H2	Q8N162	312 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	GALNT15	Q8N3T1	639 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ADAMTS15	Q8TE58	950 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	WFIKKN2	Q8TEU8	576 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ZNF641	Q96N77	438 aa	Predicted RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	MACROD1	Q9BQ69	325 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	SLC35A5	Q9BS91	424 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	CXorf21	Q9HAI6	301 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	PLAC1	Q9HBJ0	212 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	AIG1	Q9NVV5	245 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ZNF780B	Q9Y6R6	833 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	NRXN2	Q9P2S2	1712 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	EDDM13	A0A1B0GTR0	161 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	SMIM31	A0A1B0GVY4	71 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	FEZF1	A0PJY2	475 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	AQP12B	A6NM10	295 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771		H3BQ06	376 aa	Predicted RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	UBFD1	O14562	309 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	GNB5	O14775	395 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	MID1	O15344	667 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	SCEL	O95171	688 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	C6orf47	O95873	294 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	F11	P03951	625 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	ADAR	P55265	1226 aa	Known RBP	11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	XIAP	P98170	497 aa		11.48	□□□□□ -0.57
DDR1-223	ENST00000324771	SRSF11	Q05519	484 aa	Known RBP	11.48	□□□□□ -0.57

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