RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 OR5AR1Q8NGP9 310 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 CCL4L1Q8NHW4 92 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 ACTRT2Q8TDY3 377 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 THTPAQ9BU02 230 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 MENTQ9BUN1 341 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 NTMT1Q9BV86 223 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 TRIT1Q9H3H1 467 aaKnown RBP12.35□□□□□ -0.43
DDX39A-202ENST00000324340 MVB12BQ9H7P6 319 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 NOL11Q9H8H0 719 aaKnown RBP12.35□□□□□ -0.43
DDX39A-202ENST00000324340 IPPKQ9H8X2 491 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 PRDM8Q9NQV8 689 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 UBAP1Q9NZ09 502 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 SPATA7Q9P0W8 599 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 TBC1D29Q9UFV1 150 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 TRAF6Q9Y4K3 522 aa12.35□□□□□ -0.43
DDX39A-202ENST00000324340 TNRC6BQ9UPQ9 1833 aaKnown RBP12.35□□□□□ -0.43
DDX39A-202ENST00000324340 TRPC5OSA6NMA1 111 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 TMEM233B4DJY2 109 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 AZIN1O14977 448 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 WDR47O94967 919 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 C8BP07358 591 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 AK4P27144 223 aaPredicted RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 PRDX3P30048 256 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 CPOXP36551 454 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 HSD17B2P37059 387 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 IDH3AP50213 366 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 ERVPABLB-1P60509 514 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 ILF3Q12906 894 aaKnown RBP eCLIP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 TUBB3Q13509 450 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 RPE65Q16518 533 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 BCL2A1Q16548 175 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 NADK2Q4G0N4 442 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 PMS2CLQ68D20 193 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 DUS1LQ6P1R4 473 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 KLHL35Q6PF15 583 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 GPRIN3Q6ZVF9 776 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 PHACTR4Q8IZ21 702 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 DTWD2Q8NBA8 298 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 AGR3Q8TD06 166 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 MAPK15Q8TD08 544 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 MAELQ96JY0 434 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 C12orf66Q96MD2 445 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 EBF4Q9BQW3 602 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 SGPP1Q9BX95 441 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 NUSAP1Q9BXS6 441 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 GSDMCQ9BYG8 508 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 NMUR2Q9GZQ4 415 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 ATG10Q9H0Y0 220 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 DNAJC11Q9NVH1 559 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 INTS7Q9NVH2 962 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
DDX39A-202ENST00000324340 DTNAQ9Y4J8 743 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 HEBP2Q9Y5Z4 205 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 TRIOO75962 3097 aa12.34□□□□□ -0.43
DDX39A-202ENST00000324340 TMEM247A6NEH6 219 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 PDZK1P1A8MUH7 402 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 E7ENX8 843 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 GIPC1O14908 333 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 SCAMP1O15126 338 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 CSF2P04141 144 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 JUNP05412 331 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 ENO1P06733 434 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 EBLN1P0CF75 366 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 UROSP10746 265 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 MTHFD1P11586 935 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 F3P13726 295 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 VARSP26640 1264 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 ACTR1BP42025 376 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 HALP42357 657 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 PNLIPRP1P54315 467 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 FOXA1P55317 472 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 NXPH1P58417 271 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 ACTR1AP61163 376 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 TAP2Q03519 686 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 E2F2Q14209 437 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 RBBP7Q16576 425 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 CYP2A13Q16696 494 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 GGTA1PQ4G0N0 100 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 LETMD1Q6P1Q0 360 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 RNF165Q6ZSG1 346 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 THOC6Q86W42 341 aaKnown RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 OR4F6Q8NGB9 312 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 ZFP28Q8NHY6 868 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 HMGCLL1Q8TB92 370 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 PYCR2Q96C36 320 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 OR4K3Q96R72 315 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 TCEAL2Q9H3H9 227 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 MEAF6Q9HAF1 191 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 GPRC5BQ9NZH0 403 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
DDX39A-202ENST00000324340 SLC22A14Q9Y267 594 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 ANGPTL3Q9Y5C1 460 aa12.33□□□□□ -0.44
DDX39A-202ENST00000324340 CFAP20Q9Y6A4 193 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms