RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ENDOVQ8N8Q3 282 aaKnown RBP17.77■□□□□ 0.44
USP39-201ENST00000323701 OR13H1Q8NG92 308 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 SLC5A11Q8WWX8 675 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 WDR92Q96MX6 357 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 OR2M4Q96R27 311 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 EBPLQ9BY08 206 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 LTB4R2Q9NPC1 389 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 TAC3Q9UHF0 121 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 CROTQ9UKG9 612 aa17.77■□□□□ 0.44
USP39-201ENST00000323701 VPS13AQ96RL7 3174 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 EEDO75530 441 aaKnown RBP17.77■□□□□ 0.43
USP39-201ENST00000323701 B3GALT4O96024 378 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 C1GALT1C1LP0DN25 315 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 SDC1P18827 310 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 SLC7A2P52569 658 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 PLIN5Q00G26 463 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 SFSWAPQ12872 951 aaKnown RBP17.77■□□□□ 0.43
USP39-201ENST00000323701 CYP2A13Q16696 494 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 UAP1L1Q3KQV9 507 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 ATG9BQ674R7 924 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 Q6ZSR6 202 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 JPH3Q8WXH2 748 aaPredicted RBP17.77■□□□□ 0.43
USP39-201ENST00000323701 WDR34Q96EX3 536 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 CMTM7Q96FZ5 175 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 CAMK1GQ96NX5 476 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 TSSK3Q96PN8 268 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 CUEDC1Q9NWM3 386 aaPredicted RBP17.77■□□□□ 0.43
USP39-201ENST00000323701 NDE1Q9NXR1 346 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 ASIC5Q9NY37 505 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 WSB2Q9NYS7 404 aaPredicted RBP17.77■□□□□ 0.43
USP39-201ENST00000323701 TMEM181Q9P2C4 612 aa17.77■□□□□ 0.43
USP39-201ENST00000323701 SERTM1A2A2V5 107 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 NME4O00746 187 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 IDSP22304 550 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 ZP2Q05996 745 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 ALG11Q2TAA5 492 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SMU1Q2TAY7 513 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 NXPE4Q6UWF7 544 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SIX5Q8N196 739 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PYDC1Q8WXC3 89 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 ROPN1LQ96C74 230 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 LRRC58Q96CX6 371 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 C11orf24Q96F05 449 aaPredicted RBP17.76■□□□□ 0.43
USP39-201ENST00000323701 PCDHAC1Q9H158 963 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 DCLRE1BQ9H816 532 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SPAG4Q9NPE6 437 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 VPS29Q9UBQ0 182 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 CD300AQ9UGN4 299 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 DYRK1BQ9Y463 629 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SPEGQ15772 3267 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PIPSLA2A3N6 862 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 KLHL33A6NCF5 533 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 NPIPB8E9PQR5 432 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PI15O43692 258 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SLC6A2P23975 617 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PHC1P78364 1004 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 IRX1P78414 480 aaPredicted RBP17.76■□□□□ 0.43
USP39-201ENST00000323701 RPE65Q16518 533 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 SPANXN4Q5MJ08 99 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 FAM20CQ8IXL6 584 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 KIAA2013Q8IYS2 634 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PCYOX1LQ8NBM8 494 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 TSPEARQ8WU66 669 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 TCEAL2Q9H3H9 227 aaPredicted RBP17.76■□□□□ 0.43
USP39-201ENST00000323701 CMTM6Q9NX76 183 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 INVSQ9Y283 1065 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 PCDHGA11Q9Y5H2 935 aa17.76■□□□□ 0.43
USP39-201ENST00000323701 ARHGEF17Q96PE2 2063 aaPredicted RBP17.75■□□□□ 0.43
USP39-201ENST00000323701 ACOT8O14734 319 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 AXIN1O15169 862 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 AKT2P31751 481 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 RPS13P62277 151 aaKnown RBP17.75■□□□□ 0.43
USP39-201ENST00000323701 PRKCQQ04759 706 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 CSTF3Q12996 717 aaKnown RBP17.75■□□□□ 0.43
USP39-201ENST00000323701 FAM174BQ3ZCQ3 159 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 RABL3Q5HYI8 236 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 CACHD1Q5VU97 1274 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 KIAA0895LQ68EN5 471 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 NOXRED1Q6NXP6 359 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 MED27Q6P2C8 311 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 SLC30A9Q6PML9 568 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 VN1R5Q7Z5H4 357 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 SLC15A3Q8IY34 581 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 DEFB119Q8N690 84 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 DNAJB14Q8TBM8 379 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 GFM2Q969S9 779 aaKnown RBP17.75■□□□□ 0.43
USP39-201ENST00000323701 ORAI3Q9BRQ5 295 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 KLF15Q9UIH9 416 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 PPT2Q9UMR5 302 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 C15orf41Q9Y2V0 281 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 NEUROG3Q9Y4Z2 214 aa17.75■□□□□ 0.43
USP39-201ENST00000323701 GOLGA4Q13439 2230 aaKnown RBP17.75■□□□□ 0.43
USP39-201ENST00000323701 TRBV23OR9-2A0A075B6M9 112 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 LRATO95237 230 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 APBB3O95704 486 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 RPN2P04844 631 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 ME2P23368 584 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 STARD6P59095 220 aa17.74■□□□□ 0.43
USP39-201ENST00000323701 RAE1P78406 368 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms