RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ALPPP05187 535 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HSMCR30P0CW71 290 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PRKAR1AP10644 381 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HOXA9P31269 272 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MAXP61244 160 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MTAPQ13126 283 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MAB21L1Q13394 359 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 USP39Q53GS9 565 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 NLRP8Q86W28 1048 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ENTHD1Q8IYW4 607 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RGL4Q8IZJ4 473 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 NAT16Q8N8M0 369 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HCAR2Q8TDS4 363 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 USP7Q93009 1102 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SLC39A13Q96H72 371 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PANX1Q96RD7 426 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PRDM5Q9NQX1 630 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TLR8Q9NR97 1041 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SNX10Q9Y5X0 201 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MAGEB17A8MXT2 336 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF670-ZNF695F2Z2N8 137 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 M0QZ92 97 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CLIC1O00299 241 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CLDN9O95484 217 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HIST1H2AGP0C0S8 130 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ACADMP11310 421 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HIST1H2ADP20671 130 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 AP2S1P53680 142 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PLIN5Q00G26 463 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TAGLNQ01995 201 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CACNG1Q06432 222 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RING1Q06587 406 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LARS2Q15031 903 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DUOXA1Q1HG43 343 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GGTA1PQ4G0N0 100 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CCDC58Q4VC31 144 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ANXA8L1Q5VT79 327 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TRIQKQ629K1 86 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PTRHD1Q6GMV3 140 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LETMD1Q6P1Q0 360 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 Q8N9G6 341 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ANKK1Q8NFD2 765 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PROKR2Q8NFJ6 384 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OR10G2Q8NGC3 310 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OMA1Q96E52 524 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HIST1H2AHQ96KK5 128 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HIST1H2AJQ99878 128 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 H2AFJQ9BTM1 129 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ADAM30Q9UKF2 790 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HCN4Q9Y3Q4 1203 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CCL27Q9Y4X3 112 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ASB4Q9Y574 426 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CDK5RAP2Q96SN8 1893 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 IGLV3-10A0A075B6K4 115 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1W2PQ09 198 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1W2PQ72 361 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 APBA3O96018 575 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TSPAN19P0C672 248 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MAGP20916 626 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PRPH2P23942 346 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DAB2P98082 770 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ABRAXAS2Q15018 415 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 IFI44LQ53G44 452 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CARD16Q5EG05 197 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 UBXN11Q5T124 520 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PLAG1Q6DJT9 500 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OVOS1Q6IE37 1185 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 FAM171BQ6P995 826 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GLT6D1Q7Z4J2 308 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 BBS7Q8IWZ6 715 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 IL17RCQ8NAC3 791 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OR8J1Q8NGP2 316 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SELENOMQ8WWX9 145 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PSMG2Q969U7 264 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TTPALQ9BTX7 342 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ZBTB20Q9HC78 741 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ATP13A2Q9NQ11 1180 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RBFOX1Q9NWB1 397 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TMA7Q9Y2S6 64 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 POLR2CP19387 275 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SDC2P34741 201 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ASMTP46597 345 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LYPLAL1Q5VWZ2 237 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SBSNQ6UWP8 590 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RFPL4BQ6ZWI9 263 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SAMD7Q7Z3H4 446 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SPATA2LQ8IUW3 424 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RBFAQ8N0V3 343 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM130Q8N3G9 435 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 C19orf18Q8NEA5 215 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OR4A15Q8NGL6 344 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 UTP15Q8TED0 518 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 HMCESQ96FZ2 354 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CMTM7Q96FZ5 175 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TTYH2Q9BSA4 534 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DOHHQ9BU89 302 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SRRQ9GZT4 340 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 IKZF5Q9H5V7 419 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GOLGA2P5Q9HBQ8 144 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms