RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 AURKBQ96GD4 344 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TSSK3Q96PN8 268 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 RHNO1Q9BSD3 238 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TBCDQ9BTW9 1192 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 YIPF2Q9BWQ6 316 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MIR1-1HGQ9H1L0 117 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 THG1LQ9NWX6 298 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 DPP7Q9UHL4 492 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ALPK3Q96L96 1907 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PABPN1LA6NDY0 278 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ARHGEF33A8MVX0 844 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 HOXC11O43248 304 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SLC22A3O75751 556 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SOD1P00441 154 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 OTCP00480 354 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PDYNP01213 254 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 STATHP02808 62 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CAPNS1P04632 268 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 BMP2P12643 396 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CYP4B1P13584 511 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MYF6P23409 242 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TACR1P25103 407 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 GSSP48637 474 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 RAD23AP54725 363 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CASP9P55211 416 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 NFATC3Q12968 1075 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 KCNC3Q14003 757 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 DGCR6Q14129 220 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 INPP5AQ14642 412 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SPCS2Q15005 226 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MEP1AQ16819 746 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TECPR1Q7Z6L1 1165 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 KIAA0907Q7Z7F0 614 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 GPR149Q86SP6 731 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM126BQ8IUX1 230 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 FAM20CQ8IXL6 584 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 KIAA2013Q8IYS2 634 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 AADATQ8N5Z0 425 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TMCO5AQ8N6Q1 288 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PCYOX1LQ8NBM8 494 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ASZ1Q8WWH4 475 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PARVBQ9HBI1 364 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MRPL40Q9NQ50 206 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MBNL1Q9NR56 388 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SMPD3Q9NY59 655 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 NUDT4Q9NZJ9 180 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MARK1Q9P0L2 795 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CLEC1BQ9P126 229 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CDH7Q9ULB5 785 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PAIP2BQ9ULR5 123 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CA5BQ9Y2D0 317 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PPIL1Q9Y3C6 166 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 GPR45Q9Y5Y3 372 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PRAMEF33A0A0G2JMD5 474 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CCDC154A6NI56 674 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CFAP99D6REC4 459 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 E7EQ34 232 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 LSM1O15116 133 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PRNPP04156 253 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 LAMP2P13473 410 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF8P17098 575 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 RPS3P23396 243 aaKnown RBP eCLIP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 IDUAP35475 653 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 OPRL1P41146 370 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 AQP6Q13520 282 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 DMC1Q14565 340 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PDGFRLQ15198 375 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ATP6AP1Q15904 470 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ADRM1Q16186 407 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 COL13A1Q5TAT6 717 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ABRAXAS1Q6UWZ7 409 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF547Q8IVP9 402 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SYTL1Q8IYJ3 562 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 HM13Q8TCT9 377 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SELENOMQ8WWX9 145 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 COX4I2Q96KJ9 171 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ZNF382Q96SR6 550 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CHID1Q9BWS9 393 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM245Q9H330 911 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 OSGEPL1Q9H4B0 414 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CARS2Q9HA77 564 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SDR39U1Q9NRG7 319 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 HEBP1Q9NRV9 189 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SLC23A2Q9UGH3 650 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PADI4Q9UM07 663 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 KANSL1LA0AUZ9 987 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 SLC31A1O15431 190 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 XPNPEP2O43895 674 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 NOL3O60936 208 aaKnown RBP7.37□□□□□ -1.23
TRIM55-202ENST00000315962 ALBP02768 609 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 ASGR2P07307 311 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 PIGAP37287 484 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 CAPGP40121 348 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 CD97P48960 835 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 POLR2JP52435 117 aaKnown RBP7.37□□□□□ -1.23
TRIM55-202ENST00000315962 KCNK10P57789 538 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 CHIT1Q13231 466 aa7.37□□□□□ -1.23
TRIM55-202ENST00000315962 SPIDRQ14159 915 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms