RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 NFKBIL1Q9UBC1 381 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TBC1D29Q9UFV1 150 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 AURKCQ9UQB9 309 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SCN3AQ9NY46 2000 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 LOC400499M0QZD8 3231 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PABPN1LA6NDY0 278 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PDZK1P1A8MUH7 402 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PLRG1O43660 514 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 EIF2DP41214 584 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MTHFRP42898 656 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 LIPEQ05469 1076 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 GTF2H3Q13889 308 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 CCINQ13939 588 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM25Q14258 630 aaKnown RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 BCL7AQ4VC05 210 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 WLSQ5T9L3 541 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 ARMCX6Q7L4S7 300 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 DHDDSQ86SQ9 333 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 HCAR2Q8TDS4 363 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 BMFQ96LC9 184 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MENTQ9BUN1 341 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 TRPS1Q9UHF7 1281 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 PCDHA9Q9Y5H5 950 aa6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 MAGED1Q9Y5V3 778 aaPredicted RBP6.76□□□□□ -1.33
LYSMD3-201ENST00000315948 HEATR5BQ9P2D3 2071 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 DMXL1Q9Y485 3027 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 IGKV1-8A0A0C4DH67 115 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 NVLO15381 856 aaKnown RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 MAP3K13O43283 966 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 MBTPS2O43462 519 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 KLHL18O94889 574 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 PGRP06401 933 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ABCB1P08183 1280 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 LAMP1P11279 417 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 CKMT2P17540 419 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM23P36406 574 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 FOXD4Q12950 439 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 NOXRED1Q6NXP6 359 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ENPP7Q6UWV6 458 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 LRRC70Q7Z2Q7 622 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 LRRTM4Q86VH4 590 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ANKRD53Q8N9V6 530 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 L3MBTL4Q8NA19 623 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 OR4K1Q8NGD4 311 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 OR56A3Q8NH54 315 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 OR10A6Q8NH74 314 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GTF2H4Q92759 462 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 CCDC138Q96M89 665 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SEPHS2Q99611 448 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 C19orf43Q9BQ61 176 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 C1QTNF2Q9BXJ5 285 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 TEX101Q9BY14 249 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 RPF2Q9H7B2 306 aaKnown RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 EXO1Q9UQ84 846 aaKnown RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SNX11Q9Y5W9 270 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GPR179Q6PRD1 2367 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 A0A1B0GTW7 788 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 PDLIM1O00151 329 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 AGRPO00253 132 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 TRIM38O00635 465 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 RGS14O43566 566 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 LCMT2O60294 686 aaKnown RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 BCAS2O75934 225 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 MYCLP1P12525 358 aaPredicted RBP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 JUPP14923 745 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 AMD1P17707 334 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 AP1S2P56377 157 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GRSF1Q12849 480 aaKnown RBP eCLIP6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GRAMD1BQ3KR37 738 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 METRNLQ641Q3 311 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ANKRD34AQ69YU3 496 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 HMBOX1Q6NT76 420 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 OR52E6Q96RD3 313 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 DPY30Q9C005 99 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SERHLQ9NQF3 203 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 PCDHB14Q9Y5E9 798 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SCN2AQ99250 2005 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ARPC2O15144 300 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ADH1BP00325 375 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 KRT6AP02538 564 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 KRT6BP04259 564 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SERPIND1P05546 499 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 HRH2P25021 359 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 KRT6CP48668 564 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 HNMTP50135 292 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 PNLIPRP1P54315 467 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 AP2B1P63010 937 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 C1orf61Q13536 156 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GSTA3Q16772 222 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 MTX3Q5HYI7 312 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 C6orf163Q5TEZ5 329 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 GPR153Q6NV75 609 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 ZNF852Q6ZMS4 543 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SPATA19Q7Z5L4 167 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 PDZD3Q86UT5 571 aa6.75□□□□□ -1.33
LYSMD3-201ENST00000315948 SLC22A18ASQ8N1D0 253 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms