RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PLAGL1Q9UM63 463 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 DYRK1BQ9Y463 629 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PCDHB14Q9Y5E9 798 aa17.75■□□□□ 0.43
CCDC43-201ENST00000315286 PRR23AA6NEV1 266 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 SMNDC1O75940 238 aaKnown RBP eCLIP17.74■□□□□ 0.43
CCDC43-201ENST00000315286 BMP2P12643 396 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 HSD3B1P14060 373 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 HSD3B2P26439 372 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 ACSM2AQ08AH3 577 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 NRF1Q16656 503 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 ACSM2BQ68CK6 577 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 MED27Q6P2C8 311 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 MTSS1LQ765P7 747 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 SYT12Q8IV01 421 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 TRPV3Q8NET8 790 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 TFGQ92734 400 aaPredicted RBP17.74■□□□□ 0.43
CCDC43-201ENST00000315286 CIB1Q99828 191 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 DLGAP2Q9P1A6 1054 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 RUVBL1Q9Y265 456 aaKnown RBP17.74■□□□□ 0.43
CCDC43-201ENST00000315286 MAN2B2Q9Y2E5 1009 aa17.74■□□□□ 0.43
CCDC43-201ENST00000315286 A6NHS1 94 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 DENRO43583 198 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ERN1O75460 977 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 PCSK2P16519 638 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 CKMT2P17540 419 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 PRPS1L1P21108 318 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 NTSR1P30989 418 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 TRIM23P36406 574 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 LTBRP36941 435 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 MTHFRP42898 656 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 METRNLQ641Q3 311 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 OXR1Q8N573 874 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ANKFN1Q8N957 763 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 TP53I13Q8NBR0 393 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 RAD51AP1Q96B01 352 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 WDR34Q96EX3 536 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ITCHQ96J02 903 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 SLC29A1Q99808 456 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 VCXQ9H320 206 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 WDR26Q9H7D7 661 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 PRM3Q9NNZ6 103 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 SCOCQ9UIL1 159 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 MAGEL2Q9UJ55 1249 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 RAB26Q9ULW5 256 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 A0A096LPI6 279 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 KANSL1LA0AUZ9 987 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 FAM149AA5PLN7 773 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 GSNP06396 782 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ZCCHC18P0CG32 403 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 C1GALT1C1LP0DN25 315 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 UMPSP11172 480 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 CDKN2CP42773 168 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 RPS13P62277 151 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 RAE1P78406 368 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 PRKCQQ04759 706 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 HTR4Q13639 388 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 SLBPQ14493 270 aaKnown RBP eCLIP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 LRIF1Q5T3J3 769 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ATG9BQ674R7 924 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 OR4F3Q6IEY1 312 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 GPR180Q86V85 440 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 PHACTR4Q8IZ21 702 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 C2orf73Q8N5S3 287 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 C1orf52Q8N6N3 182 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 OR2T12Q8NG77 320 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 OR7A2PQ8NGA2 310 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 NSMCE2Q96MF7 247 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 NRTNQ99748 197 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 OSBPL6Q9BZF3 934 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 RMND5AQ9H871 391 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 CCDC177Q9NQR7 707 aaPredicted RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 AGPAT4Q9NRZ5 378 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 GEMIN8Q9NWZ8 242 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 ANAPC2Q9UJX6 822 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 TDRKHQ9Y2W6 561 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 CFAP20Q9Y6A4 193 aaKnown RBP17.73■□□□□ 0.43
CCDC43-201ENST00000315286 AP4B1Q9Y6B7 739 aa17.73■□□□□ 0.43
CCDC43-201ENST00000315286 C7orf72A4D263 438 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 DPPA5A6NC42 116 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 ADAM23O75077 832 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 FUCA1P04066 466 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 GGT1P19440 569 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 FASP25445 335 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 PTPN6P29350 595 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 PDK3Q15120 406 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 UGT8Q16880 541 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 OR14C36Q8NHC7 312 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 DNAJB8Q8NHS0 232 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 SLC5A11Q8WWX8 675 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 AURKBQ96GD4 344 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-201ENST00000315286 METTL2AQ96IZ6 378 aaKnown RBP17.72■□□□□ 0.43
CCDC43-201ENST00000315286 GABRG3Q99928 467 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 SH3GL1Q99961 368 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 C1QTNF2Q9BXJ5 285 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 DNMT3AQ9Y6K1 912 aaPredicted RBP17.72■□□□□ 0.43
CCDC43-201ENST00000315286 V9GYQ6 96 aa17.72■□□□□ 0.43
CCDC43-201ENST00000315286 KMOO15229 486 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 EGFP01133 1207 aa17.71■□□□□ 0.43
CCDC43-201ENST00000315286 HOXB9P17482 250 aaPredicted RBP17.71■□□□□ 0.43
CCDC43-201ENST00000315286 KELP23276 732 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms