RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 XKP51811 444 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CDK6Q00534 326 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 COLEC12Q5KU26 742 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 RPTNQ6XPR3 784 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 NXPE1Q8N323 547 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 MEIOBQ8N635 442 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 FLCNQ8NFG4 579 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 OR10T2Q8NGX3 314 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ZFAND2BQ8WV99 257 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 IGSF8Q969P0 613 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 SP140LQ9H930 580 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ANKRA2Q9H9E1 313 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 GPC6Q9Y625 555 aaPredicted RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 FABP12A6NFH5 140 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 DHRS4L1P0CG22 281 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 ETV4P43268 484 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 BDKRB1P46663 353 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 RING1Q06587 406 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 AGTRAPQ6RW13 159 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CEP295NLQ96MC4 621 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 RANBP9Q96S59 729 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 PKP4Q99569 1192 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 SMURF2Q9HAU4 748 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 MRPS30Q9NP92 439 aaKnown RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 NECTIN3Q9NQS3 549 aa13.42□□□□□ -0.26
SPAST-201ENST00000315285 CCM2LQ9NUG4 571 aaPredicted RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 THUMPD1Q9NXG2 353 aaKnown RBP13.42□□□□□ -0.26
SPAST-201ENST00000315285 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 J3QRK9 145 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ABCB7O75027 752 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 CPN2P22792 545 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 NUDT6P53370 316 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 C22orf39Q6P5X5 142 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 CYB5D2Q8WUJ1 264 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 PPP1R14BQ96C90 147 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 FBXL8Q96CD0 374 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 PRSS51A0A1B0GVH4 220 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ALPPP05187 535 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 MAT2AP31153 395 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 FAUP35544 74 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 PTGES3Q15185 160 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 GPRC6AQ5T6X5 926 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ZNF598Q86UK7 904 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 MARVELD2Q8N4S9 558 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 NATD1Q8N6N6 113 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 TP53INP1Q96A56 240 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ZNF354BQ96LW1 612 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 CAMK1GQ96NX5 476 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 RAB11FIP5Q9BXF6 653 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 TAS2R7Q9NYW3 318 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 NENFQ9UMX5 172 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 SPIN1Q9Y657 262 aaPredicted RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 LINGO3P0C6S8 592 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 CCND3P30281 292 aaPredicted RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 RORCP51449 518 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 SUZ12Q15022 739 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 TLR1Q15399 786 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 NDUFA9Q16795 377 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ITPAQ9BY32 194 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 UPK3BL1B0FP48 263 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 UPK3BL2E5RIL1 263 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 WWP2O00308 870 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 MNDAP41218 407 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 TMEM44Q2T9K0 475 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 XKR5Q6UX68 686 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 SYVN1Q86TM6 617 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 NPAS3Q8IXF0 933 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 GPR135Q8IZ08 494 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 ZNF366Q8N895 744 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 TTLQ8NG68 377 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 OR10H4Q8NGA5 316 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 OR4C6Q8NH72 309 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
SPAST-201ENST00000315285 OR51V1Q9H2C8 321 aa13.41□□□□□ -0.26
SPAST-201ENST00000315285 TLR4O00206 839 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 CLDN4O14493 209 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ACOX3O15254 700 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 EDIL3O43854 480 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 RLN1P04808 185 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 IQCF3P0C7M6 154 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 TLE2Q04725 743 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 PTGR1Q14914 329 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ATP6AP1Q15904 470 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 FAM91A1Q658Y4 838 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 POMZP3Q6PJE2 187 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 CCDC80Q76M96 950 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 SLC15A3Q8IY34 581 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 MINDY2Q8NBR6 621 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 KLK6Q92876 244 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 CRELD1Q96HD1 420 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 SRMSQ9H3Y6 488 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 PHF11Q9UIL8 331 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 ZCWPW2A0A1B0GU75 182 aa13.4□□□□□ -0.26
SPAST-201ENST00000315285 LRRC72A6NJI9 287 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms