RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 SLC36A4Q6YBV0 504 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 PLEKHG7Q6ZR37 379 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ABHD13Q7L211 337 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 TRAPPC5Q8IUR0 188 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ADAMTS15Q8TE58 950 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 LRFN5Q96NI6 719 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 MECRQ9BV79 373 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SALL4Q9UJQ4 1053 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ERVK-11Q9UQG0 969 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 UGT2A1Q9Y4X1 527 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 CASC3O15234 703 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ANXA4P09525 319 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 HNRNPLP14866 589 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 BBS10Q8TAM1 723 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ARNT2Q9HBZ2 717 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 MARK1Q9P0L2 795 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SNRNP200O75643 2136 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 A0A1W2PRB8 838 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 CHRNA1P02708 482 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 XKP51811 444 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 TRA2BP62995 288 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ANKRD13BQ86YJ7 626 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 OR52K2Q8NGK3 314 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 KBTBD7Q8WVZ9 684 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 EDEM1Q92611 657 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 ACSF2Q96CM8 615 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 MED17Q9NVC6 651 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 DOCK6Q96HP0 2047 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 PPEF2O14830 753 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 TYRP14679 529 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 MLLT6P55198 1093 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SLC39A12Q504Y0 691 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 XKR4Q5GH76 650 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 M0R233 179 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 DBTP11182 482 aaKnown RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
COL6A5-202ENST00000312481 NAPRTQ6XQN6 538 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 MOB2Q70IA6 237 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 OR4K2Q8NGD2 314 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 HCAR2Q8TDS4 363 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 PPM1MQ96MI6 270 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 POLR1DQ9Y2S0 133 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 SCN5AQ14524 2016 aa8.6□□□□□ -1.03
COL6A5-202ENST00000312481 RNF225M0QZC1 329 aaPredicted RBP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 JRKO75564 520 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 C1RP00736 705 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 LINC00032P0C843 101 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 MPC1LP0DKB6 136 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GSK3BP49841 420 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GAD2Q05329 585 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 PCBP2Q15366 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 IDNKQ5T6J7 187 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 AHSA2Q719I0 299 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 NPLOC4Q8TAT6 608 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 UPF1Q92900 1129 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 RADILQ96JH8 1075 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 STRA6Q9BX79 667 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 NLE1Q9NVX2 485 aaPredicted RBP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 RP2O75695 350 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GSRP00390 522 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF550Q7Z398 422 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 SYVN1Q86TM6 617 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ZNF227Q86WZ6 799 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ZFAND4Q86XD8 727 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 KIAA0319LQ8IZA0 1049 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 DOHHQ9BU89 302 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ATPIF1Q9UII2 106 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 PCDHB9Q9Y5E1 797 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 MEGF11A6BM72 1044 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 PFKMP08237 780 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 TSPAN8P19075 237 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 HLA-FP30511 346 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 TPTEP56180 551 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 MYBPC1Q00872 1141 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 TOR1AIP1Q5JTV8 583 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 KLHL24Q6TFL4 600 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ATG14Q6ZNE5 492 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 LACC1Q8IV20 430 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CST11Q9H112 138 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 FAM83DQ9H4H8 585 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 UCKL1Q9NWZ5 548 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 XIRP1Q702N8 1843 aaKnown RBP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 A8MT66 165 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 RFPL1O75677 317 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 GADD45GO95257 159 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ADAP00813 363 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CCR10P46092 362 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CDH8P55286 799 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 HMGN3Q15651 99 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 PRAMEF8Q5VWM4 474 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 PRAMEF7Q5VXH5 474 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 LPCAT4Q643R3 524 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 RDH14Q9HBH5 336 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 BRCA1P38398 1863 aaKnown RBP8.59□□□□□ -1.03
COL6A5-202ENST00000312481 UBE2Q2LH0YL09 131 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 EPORP19235 508 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 CCINQ13939 588 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 ZMYND11Q15326 602 aa8.59□□□□□ -1.03
COL6A5-202ENST00000312481 FAM69AQ5T7M9 428 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms