RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 OR9A1PQ8NGU1 263 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 OR2T34Q8NGX1 318 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 UTP15Q8TED0 518 aaKnown RBP5.84□□□□□ -1.47
SEC22A-201ENST00000309934 GDPD5Q8WTR4 605 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 CYB5D2Q8WUJ1 264 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 FOXJ1Q92949 421 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 CMTM7Q96FZ5 175 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 PHF12Q96QT6 1004 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 CIB1Q99828 191 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 OSGEPL1Q9H4B0 414 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 KLHL31Q9H511 634 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 MIEF1Q9NQG6 463 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 IGSF5Q9NSI5 407 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 TOR4AQ9NXH8 423 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 CXXC1Q9P0U4 656 aaPredicted RBP5.84□□□□□ -1.47
SEC22A-201ENST00000309934 SH3BGRL2Q9UJC5 107 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 FBXO10Q9UK96 956 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 NOX1Q9Y5S8 564 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 PSAT1Q9Y617 370 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 DOCK3Q8IZD9 2030 aa5.84□□□□□ -1.47
SEC22A-201ENST00000309934 MEI4A8MW99 385 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 NR5A2O00482 541 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 AREL1O15033 823 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 DCXO43602 365 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 PSIP1O75475 530 aaKnown RBP5.84□□□□□ -1.48
SEC22A-201ENST00000309934 APBB3O95704 486 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 ALPPL2P10696 532 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 GNSP15586 552 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 TIMP2P16035 220 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 PPP2R1BP30154 601 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 GJA4P35212 333 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 PRLHRP49683 370 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 NCALDP61601 193 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 EFR3AQ14156 821 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 CLCA4Q14CN2 919 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 PLCL1Q15111 1095 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 TGFBIQ15582 683 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 SMAD1Q15797 465 aaKnown RBP5.84□□□□□ -1.48
SEC22A-201ENST00000309934 SSX2Q16385 188 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 CARTPTQ16568 116 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 SPDYE7PQ495Y7 208 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 C6orf10Q5SRN2 563 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 ZNF600Q6ZNG1 722 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 BEND4Q6ZU67 534 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 KIAA0907Q7Z7F0 614 aaPredicted RBP5.84□□□□□ -1.48
SEC22A-201ENST00000309934 MMAAQ8IVH4 418 aaKnown RBP5.84□□□□□ -1.48
SEC22A-201ENST00000309934 OR2A12Q8NGT7 310 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 TEX47Q8TBZ9 253 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 NARS2Q96I59 477 aaKnown RBP5.84□□□□□ -1.48
SEC22A-201ENST00000309934 ARL5BQ96KC2 179 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 WDR92Q96MX6 357 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 C1QTNF3Q9BXJ4 246 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 CCDC90BQ9GZT6 254 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 SLCO1B3Q9NPD5 702 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 PNPOQ9NVS9 261 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 HCFC1R1Q9NWW0 138 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 POLHQ9Y253 713 aa5.84□□□□□ -1.48
SEC22A-201ENST00000309934 FRMPD3Q5JV73 1810 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CCDC182A6NF36 153 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 NIPSNAP2O75323 286 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 PRPS1L1P21108 318 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 NR4A1P22736 598 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 MPSTP25325 297 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 PTX3P26022 381 aaPredicted RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CCR8P51685 355 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 MAPK10P53779 464 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 EEFSECP57772 596 aaKnown RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 DEFA1P59665 94 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 DEFA3P59666 94 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CHRNB3Q05901 458 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 GALNTL6Q49A17 601 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 OGFOD2Q6N063 350 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 MBOAT1Q6ZNC8 495 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CYP4Z1Q86W10 505 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 DHFR2Q86XF0 187 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 TBC1D21Q8IYX1 336 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 GJD3Q8N144 294 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ZCCHC7Q8N3Z6 543 aaKnown RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 LILRB4Q8NHJ6 448 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ADAMTS18Q8TE60 1221 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 FKBP10Q96AY3 582 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 TCEAL4Q96EI5 215 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 KCTD14Q9BQ13 255 aaPredicted RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ABCG8Q9H221 673 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 NOL11Q9H8H0 719 aaKnown RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 IL26Q9NPH9 171 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 MLXQ9UH92 298 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ACAD8Q9UKU7 415 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 NEU3Q9UQ49 428 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ERVK-11Q9UQG0 969 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 GPSM3Q9Y4H4 160 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 GNG14A0A1W2PPG7 69 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 UBXN8O00124 270 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CLOCKO15516 846 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 ERN1O75460 977 aaKnown RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 CRTAPO75718 401 aaPredicted RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 DNAJB5O75953 348 aa5.83□□□□□ -1.48
SEC22A-201ENST00000309934 RPS17P08708 135 aaKnown RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 HOXC4P09017 264 aaPredicted RBP5.83□□□□□ -1.48
SEC22A-201ENST00000309934 TMEM11P17152 192 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms