RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ATG9BQ674R7 924 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 RAET1GQ6H3X3 334 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 FAM180BQ6P0A1 224 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ERAP2Q6P179 960 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF551Q7Z340 670 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ERI1Q8IV48 349 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 C12orf76Q8N812 135 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 CSGALNACT1Q8TDX6 532 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 BTN2A2Q8WVV5 523 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 MAL2Q969L2 176 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 CCDC115Q96NT0 180 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 BARD1Q99728 777 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 OSBPL6Q9BZF3 934 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 AMBRA1Q9C0C7 1298 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 C8orf4Q9NR00 106 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 STOX2Q9P2F5 926 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PPIL1Q9Y3C6 166 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 COL4A6Q14031 1691 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 H0Y858 1186 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 K7ESM1 405 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 SGTAO43765 313 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 TLL1O43897 1013 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 MOSPD3O75425 235 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ATE1O95260 518 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 NUDT7P0C024 238 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 MPC1LP0DKB6 136 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 C7P10643 843 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PRPS1L1P21108 318 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 FGD3Q5JSP0 725 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 IER5LQ5T953 404 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 TTC23Q5W5X9 447 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PARS2Q7L3T8 475 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 GPR149Q86SP6 731 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ARL10Q8N8L6 244 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 MRPL43Q8N983 215 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 L3MBTL4Q8NA19 623 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 OR4K1Q8NGD4 311 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PYURFQ96I23 114 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ZSCAN5AQ9BUG6 496 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 RAPGEFL1Q9UHV5 662 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ABCG2Q9UNQ0 655 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 DGKBQ9Y6T7 804 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 WASH3PC4AMC7 463 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 LZTS3O60299 673 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ZBTB11O95625 1053 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 CEBPBP17676 345 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ABHD18Q0P651 414 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF805Q5CZA5 627 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 CATSPEREQ5SY80 951 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PDE12Q6L8Q7 609 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 HORMAD1Q86X24 394 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 LEMD2Q8NC56 503 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 ABTB1Q969K4 478 aaPredicted RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 OR4K3Q96R72 315 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 PKP4Q99569 1192 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 RBM4BQ9BQ04 359 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 RBM4Q9BWF3 364 aaKnown RBP11.18□□□□□ -0.62
PTPN2-201ENST00000309660 C3orf18Q9UK00 162 aa11.18□□□□□ -0.62
PTPN2-201ENST00000309660 AXIN1O15169 862 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 XPNPEP2O43895 674 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TGFB1P01137 390 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 RPS13P62277 151 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 FNDC3BQ53EP0 1204 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 HENMT1Q5T8I9 393 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ARHGAP22Q7Z5H3 698 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 C12orf40Q86WS4 652 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 FAM9CQ8IZT9 166 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CHCHD4Q8N4Q1 142 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TRAM1L1Q8N609 369 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 HUS1BQ8NHY5 278 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CNIH3Q8TBE1 160 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 NEIL2Q969S2 332 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 OSBPL10Q9BXB5 764 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 C11orf49Q9H6J7 331 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 RUBCNLQ9H714 662 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 VNN3Q9NY84 501 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 KIF17Q9P2E2 1029 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TBC1D14Q9P2M4 693 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF639Q9UID6 485 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 FAM220BPB1ANY3 271 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 H0YAE9 185 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 WNT9AO14904 365 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 OPN1SWP03999 348 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 GSTM1P09488 218 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ARHGDIAP52565 204 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 GSTM4Q03013 218 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CD47Q08722 323 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 SP140Q13342 867 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 DHCR24Q15392 516 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 DUOXA1Q1HG43 343 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 BROXQ5VW32 411 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 METTL2BQ6P1Q9 378 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ATG16L2Q8NAA4 619 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 REXO5Q96IC2 774 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 DUSP26Q9BV47 211 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 SPASTQ9UBP0 616 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 INSL6Q9Y581 213 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 KCNE2Q9Y6J6 123 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms