RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MPPE1Q53F39 396 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 AVPI1Q5T686 147 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 ERMP1Q7Z2K6 904 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 LHFPL3Q86UP9 236 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 KCNMB4Q86W47 210 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 SPATA6LQ8N4H0 392 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 OR52K2Q8NGK3 314 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 LHFPL5Q8TAF8 219 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 ZNF578Q96N58 590 aaPredicted RBP14.91□□□□□ -0.02
LEMD3-201ENST00000308330 KLHL5Q96PQ7 755 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 ZNF670Q9BS34 389 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 C16orf70Q9BSU1 422 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 FXYD6Q9H0Q3 95 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 C14orf105Q9NVL8 296 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 TAS2R13Q9NYV9 303 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CD300AQ9UGN4 299 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 DYRK1BQ9Y463 629 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 NCANO14594 1321 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CBY3A6NI87 242 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 TPP1O14773 563 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 SMIM18P0DKX4 95 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 IL7RP16871 459 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 KCNC1P48547 511 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 NAGLUP54802 743 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CEP68Q76N32 757 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CPA6Q8N4T0 437 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 ZNF671Q8TAW3 534 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 ASB8Q9H765 288 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CAPN10Q9HC96 672 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 NDRG2Q9UN36 371 aaKnown RBP14.91□□□□□ -0.02
LEMD3-201ENST00000308330 BANF1O75531 89 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 SLC22A5O76082 557 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 GUCA1CO95843 209 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 IGFBP5P24593 272 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 TXNL4AP83876 142 aaKnown RBP14.91□□□□□ -0.02
LEMD3-201ENST00000308330 TARDBPQ13148 414 aaKnown RBP eCLIP14.91□□□□□ -0.021e-6■■■■□ 20.5
LEMD3-201ENST00000308330 ANKRD22Q5VYY1 191 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 PSTKQ8IV42 348 aaKnown RBP14.91□□□□□ -0.02
LEMD3-201ENST00000308330 C1GALT1C1Q96EU7 318 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 VPS25Q9BRG1 176 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CDHR5Q9HBB8 845 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 AGO1Q9UL18 857 aaKnown RBP14.91□□□□□ -0.02
LEMD3-201ENST00000308330 CRYBG1Q9Y4K1 1723 aa14.91□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3DA0A087WVF3 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3IA0A087WXS9 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3EA0A087X179 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3KA0A087X1G2 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 A0A0X1KG70 313 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3FA6NER0 549 aaPredicted RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3LB9A6J9 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FSCN2O14926 492 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 LRIG2O94898 1065 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3HP0C7X1 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 ARCN1P48444 511 aaKnown RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 RABGGTBP53611 331 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 EIF2S3LQ2VIR3 472 aaKnown RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 CST9Q5W186 159 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3GQ6DHY5 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3CQ6IPX1 549 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 SMIM15Q7Z3B0 74 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TBC1D3Q8IZP1 549 aaPredicted RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 ZNF350Q9GZX5 532 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 RNF121Q9H920 327 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 APOBEC3GQ9HC16 384 aaKnown RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 SDHAF2Q9NX18 166 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 AKAP7Q9P0M2 348 aaPredicted RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 CRYL1Q9Y2S2 319 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 C5orf58C9J3I9 102 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 DLDP09622 509 aaKnown RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 RD3LP0DJH9 198 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 CHSY3Q70JA7 882 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 GALNT5Q7Z7M9 940 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FAM126BQ8IXS8 530 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 UBQLNLQ8IYU4 475 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 OR52K1Q8NGK4 314 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 RHOXF1Q8NHV9 184 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TFAP2BQ92481 460 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 NXPE2Q96DL1 559 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FUBP3Q96I24 572 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■□□ 15.7
LEMD3-201ENST00000308330 ANKRD60Q9BZ19 345 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FOLH1BQ9HBA9 442 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 RNF6Q9Y252 685 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 AQP12BA6NM10 295 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 CLEC2LP0C7M8 214 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 GPR1P46091 355 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 EXOC3L2Q2M3D2 409 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FAM198BQ6UWH4 519 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 BBS12Q6ZW61 710 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 DNAJB7Q7Z6W7 309 aaPredicted RBP14.9□□□□□ -0.02
LEMD3-201ENST00000308330 AQP12AQ8IXF9 295 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 YIPF7Q8N8F6 280 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 MFSD2AQ8NA29 543 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 TNFAIP8L1Q8WVP5 186 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 OR8D1Q8WZ84 308 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 LHPPQ9H008 270 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FAM86C1Q9NVL1 165 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 SPACA6W5XKT8 324 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 A0A1W2PRU2 124 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 FAM189A1O60320 539 aa14.9□□□□□ -0.02
LEMD3-201ENST00000308330 PFKMP08237 780 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms