RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MVB12BQ9H7P6 319 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TM9SF3Q9HD45 589 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PRMT8Q9NR22 394 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 GPRC5BQ9NZH0 403 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ZNF624Q9P2J8 865 aaPredicted RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ICKQ9UPZ9 632 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 THADAQ6YHU6 1953 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TRBV23OR9-2A0A075B6M9 112 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CLGNO14967 610 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLC22A2O15244 555 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 COX4I1P13073 169 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 F3P13726 295 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 GNAZP19086 355 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 GPX3P22352 226 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 CD38P28907 300 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PTPN4P29074 926 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PRDX6P30041 224 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLC19A1P41440 591 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MAGEA9P43362 315 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 FNTBP49356 437 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ATP4BP51164 291 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 DIO3P55073 304 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 RACK1P63244 317 aaKnown RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ILF3Q12906 894 aaKnown RBP eCLIP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SQLEQ14534 574 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 NR6A1Q15406 480 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ADNP2Q6IQ32 1131 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PAOXQ6QHF9 649 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLC36A4Q6YBV0 504 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 GK5Q6ZS86 529 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PARGQ86W56 976 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PHACTR4Q8IZ21 702 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MFSD2AQ8NA29 543 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 OR9I1Q8NGQ6 314 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 FAM174AQ8TBP5 190 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SETD7Q8WTS6 366 aaKnown RBP6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SLC5A11Q8WWX8 675 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SELENOMQ8WWX9 145 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 PATE1Q8WXA2 126 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 WDR34Q96EX3 536 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TUBB6Q9BUF5 446 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 C1orf50Q9BV19 199 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 ACAT2Q9BWD1 397 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 MIR1-1HGQ9H1L0 117 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 LRMDAQ9H2I8 198 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 RIC8BQ9NVN3 520 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 TAC3Q9UHF0 121 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 DYRK1BQ9Y463 629 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 KCNE2Q9Y6J6 123 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 SPTBN2O15020 2390 aa6.72□□□□□ -1.33
PTCD2-201ENST00000308077 WDFY4Q6ZS81 3184 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SPTAN1Q13813 2472 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 LOC100653049A0A140TA62 436 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SERTM1A2A2V5 107 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 H0YIV9 168 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SLC28A1O00337 649 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KRT34O76011 436 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KRT6AP02538 564 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KRT6BP04259 564 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 CDH1P12830 882 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 CCND1P24385 295 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 PEBP1P30086 187 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ADSLP30566 484 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 HOXA6P31267 233 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 HSD17B2P37059 387 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 HNF4AP41235 474 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ZFP36L2P47974 494 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KRT6CP48668 564 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 RAB28P51157 221 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 NME5P56597 212 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ERVK-8P63133 956 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 MEF2AQ02078 507 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 C1orf61Q13536 156 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ATP6AP1LQ52LC2 224 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 RFTN2Q52LD8 501 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 THEMIS2Q5TEJ8 643 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 FBXW10Q5XX13 1052 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 FRG2Q64ET8 278 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ATG9BQ674R7 924 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 NXPE4Q6UWF7 544 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SPATA19Q7Z5L4 167 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 IQCHQ86VS3 1027 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SNX32Q86XE0 403 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 FUNDC1Q8IVP5 155 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 MAML2Q8IZL2 1156 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 FNDC5Q8NAU1 212 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 RBM15BQ8NDT2 890 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 OR2L8Q8NGY9 312 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 DNASE2BQ8WZ79 361 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 SMPDL3AQ92484 453 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 UTP4Q969X6 686 aaKnown RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KLHL29Q96CT2 875 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 MAGEB10Q96LZ2 347 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 FRG2BQ96QU4 278 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 LRRC61Q9BV99 259 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 DUSP15Q9H1R2 295 aaPredicted RBP6.71□□□□□ -1.33
PTCD2-201ENST00000308077 ELOVL6Q9H5J4 265 aa6.71□□□□□ -1.33
PTCD2-201ENST00000308077 KIR3DX1Q9H7L2 352 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms