RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OVCA2Q8WZ82 227 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 FUZQ9BT04 418 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MCCC2Q9HCC0 563 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MS4A12Q9NXJ0 267 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 CMAHPQ9Y471 501 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 KCNJ5P48544 419 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 RBM20Q5T481 1227 aaKnown RBP12.34□□□□□ -0.43
USP38-201ENST00000307017 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
USP38-201ENST00000307017 LRRC58Q96CX6 371 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 OR2S2Q9NQN1 319 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 CLCA3PQ9Y6N3 262 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 CNTNAP4Q9C0A0 1308 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 VIPR1P32241 457 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 TAS2R39P59534 338 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 PON2Q15165 354 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MSS51Q4VC12 460 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 IFI44LQ53G44 452 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 KRBOX4Q5JUW0 171 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 GPAT4Q86UL3 456 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 GPC2Q8N158 579 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 GLIS1Q8NBF1 620 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MICAL3Q7RTP6 2002 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 TPPPO94811 219 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 HLA-DQB2P05538 268 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 IL1R2P27930 398 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 ADRA1BP35368 520 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 ZNF81P51508 661 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 DSC3Q14574 896 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 PABPC1LQ4VXU2 614 aaKnown RBP12.34□□□□□ -0.43
USP38-201ENST00000307017 MLIPQ5VWP3 458 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 SLC25A25Q6KCM7 469 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 IQCKQ8N0W5 287 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 LGI4Q8N135 537 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 CPA6Q8N4T0 437 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 STYXQ8WUJ0 223 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 RAB8BQ92930 207 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 ADAM7Q9H2U9 754 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 BRF2Q9HAW0 419 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 ARHGEF4Q9NR80 690 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 FAM118AQ9NWS6 357 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 RHPN2P1A8MT19 583 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 EDNRBP24530 442 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 RPS24P62847 133 aaKnown RBP12.33□□□□□ -0.43
USP38-201ENST00000307017 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 C1orf127Q8N9H9 656 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 ARNTL2Q8WYA1 636 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 PDZD7Q9H5P4 517 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 KCNS2Q9ULS6 477 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 C1orf167Q5SNV9 1468 aa12.33□□□□□ -0.43
USP38-201ENST00000307017 A0A1W2PRQ8 180 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 RAD1O60671 282 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 TMEM63AO94886 807 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 HSD3B1P14060 373 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CMPK1P30085 196 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 LIMK2P53671 638 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SLC26A5P58743 744 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 ATAT1Q5SQI0 421 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CRTC1Q6UUV9 634 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 PAQR7Q86WK9 346 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 NLGN4YQ8NFZ3 816 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 SLC38A3Q99624 504 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 DUSP26Q9BV47 211 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 NUDT15Q9NV35 164 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 ZNF860A6NHJ4 632 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 GRIN3BO60391 1043 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 ECI2O75521 394 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 PLGP00747 810 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 AOC1P19801 751 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 RPS14P62263 151 aaKnown RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 DCLRE1AQ6PJP8 1040 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SCLYQ96I15 445 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 MIPEPQ99797 713 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 RNF11Q9Y3C5 154 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CPED1A4D0V7 1026 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CXCR1P25024 350 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 HOXC12P31275 282 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 GPX6P59796 221 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 FAM46CQ5VWP2 391 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 LIPKQ5VXJ0 399 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 RANBP3LQ86VV4 465 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 MAFIPQ8WZ33 124 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 TAPBPLQ9BX59 468 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SLC7A8Q9UHI5 535 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SALL3Q9BXA9 1300 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 MYH13Q9UKX3 1938 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 MEIS3P1A6NDR6 274 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 YJEFN3A6XGL0 299 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 PLK4O00444 970 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SLBPQ14493 270 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP38-201ENST00000307017 HEPACAMQ14CZ8 416 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 PTGES3Q15185 160 aaKnown RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 NOXRED1Q6NXP6 359 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 UNC93AQ86WB7 457 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms