RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 WDR54Q9H977 334 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 PARVBQ9HBI1 364 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC22A11Q9NSA0 550 aa25.28■■□□□ 1.64
CDKN2A-201ENST00000304494 LOC105369274A0A096LPK9 316 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 IGKV1-8A0A0C4DH67 115 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 LOC102723532A0A0G2JNH3 316 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 PEX12O00623 359 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 EIF2S1P05198 315 aaKnown RBP25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 ITGAXP20702 1163 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 CASRP41180 1078 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 PGDP52209 483 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 RELAQ04206 551 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 MGAT5Q09328 741 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 ATP1A4Q13733 1029 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 HECTD2Q5U5R9 776 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 ZNF425Q6IV72 752 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 SYT10Q6XYQ8 523 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 MRGPREQ86SM8 312 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 LRRC56Q8IYG6 542 aaPredicted RBP25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 OR4N4Q8N0Y3 316 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 FER1L6-AS2Q96M78 137 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 SLC26A1Q9H2B4 701 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 CCDC177Q9NQR7 707 aaPredicted RBP25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 ABCF3Q9NUQ8 709 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 WHRNQ9P202 907 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 ADAMTS6Q9UKP5 1117 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 VWA7Q9Y334 891 aa25.27■■□□□ 1.64
CDKN2A-201ENST00000304494 SPTA1P02549 2419 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 PABPN1LA6NDY0 278 aaKnown RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 K7EM74 188 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 HIST1H2AGP0C0S8 130 aaPredicted RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 NR1D1P20393 614 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 HIST1H2ADP20671 130 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 HRH2P25021 359 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 EMP3P54852 163 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 MUM1Q2TAK8 710 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 PRMT9Q6P2P2 845 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 ZBED8Q8IZ13 594 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 C17orf53Q8N3J3 647 aaPredicted RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 TEX19Q8NA77 164 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 RERGQ96A58 199 aaPredicted RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 NACC2Q96BF6 587 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 HIST1H2AHQ96KK5 128 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 HIST1H2AJQ99878 128 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 H2AFJQ9BTM1 129 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 TRIM4Q9C037 500 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 PCBD2Q9H0N5 130 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 STOX2Q9P2F5 926 aaPredicted RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 NXT1Q9UKK6 140 aaKnown RBP25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 PDE10AQ9Y233 779 aa25.26■■□□□ 1.63
CDKN2A-201ENST00000304494 H0YGG7 62 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 CNOT3O75175 753 aaKnown RBP25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 CEACAM4O75871 244 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 FDXRP22570 491 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 ARF3P61204 181 aaPredicted RBP25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 TLE1Q04724 770 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 C2orf54Q08AI8 447 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 FASTKD3Q14CZ7 662 aaKnown RBP25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 PRTGQ2VWP7 1150 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 ADCK2Q7Z695 626 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 SLC26A11Q86WA9 606 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 DPH5Q9H2P9 285 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 MLXIPLQ9NP71 852 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 NSMCE4AQ9NXX6 385 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 MOCS1Q9NZB8 636 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 PCDHGB7Q9Y5F8 929 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 FER1L5A0AVI2 2057 aa25.25■■□□□ 1.63
CDKN2A-201ENST00000304494 TXNDC9O14530 226 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 RAD51CO43502 376 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 WISP1O95388 367 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 UMODP07911 640 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 CCND1P24385 295 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 TBPL1P62380 186 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 MRPS25P82663 173 aaKnown RBP25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 PRAMEF13Q5VWM6 474 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 COX15Q7KZN9 410 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 CSNK1A1LQ8N752 337 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 CABS1Q96KC9 395 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 EPN3Q9H201 632 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 ZNF304Q9HCX3 659 aa25.24■■□□□ 1.63
CDKN2A-201ENST00000304494 SEC16AO15027 2179 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 TSPAN12O95859 305 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 OR1D4P47884 311 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 CSRP3P50461 194 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 ILF2Q12905 390 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 NKG7Q16617 165 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 STRA8Q7Z7C7 330 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 PIAS4Q8N2W9 510 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 METTL27Q8N6F8 245 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 CLEC1AQ8NC01 280 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 PYROXD1Q8WU10 500 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 COL26A1Q96A83 441 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 OR2A5Q96R48 311 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 TRIM54Q9BYV2 358 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 P4HTMQ9NXG6 502 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 CDC14AQ9UNH5 594 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 UTP11Q9Y3A2 253 aaKnown RBP25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 ZNF451Q9Y4E5 1061 aa25.23■■□□□ 1.63
CDKN2A-201ENST00000304494 PYCARD-AS1I3L0S3 204 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms