RNA–Protein interactions for RNA: ENST00000303758.7

HMGN1P35-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 35, humanhuman

BASIC

Gene HMGN1P35, Length 594 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P35-201ENST00000303758 VPS50Q96JG6 964 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 ZNF285Q96NJ3 590 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 YIPF2Q9BWQ6 316 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 SOX17Q9H6I2 414 aaPredicted RBP10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 WDR54Q9H977 334 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 ZNF304Q9HCX3 659 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 SLAMF7Q9NQ25 335 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 CHMP2BQ9UQN3 213 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 KLK4Q9Y5K2 254 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 MAU2Q9Y6X3 613 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 MED13Q9UHV7 2174 aa10.39□□□□□ -0.75
HMGN1P35-201ENST00000303758 MDC1Q14676 2089 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 LOC105369274A0A096LPK9 316 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 LOC102723532A0A0G2JNH3 316 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 E7ENX8 843 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 H0YGG7 62 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 AGPSO00116 658 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 VPS4BO75351 444 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 C8GP07360 202 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 UMODP07911 640 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 EZRP15311 586 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 FBLP22087 321 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ITGA3P26006 1051 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ELK3P41970 407 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 GCGRP47871 477 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ARL4CP56559 192 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ARF3P61204 181 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 YBX1P67809 324 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ABATP80404 500 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 TAP2Q03519 686 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PRDX1Q06830 199 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 RBBP7Q16576 425 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 NKG7Q16617 165 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 HIF1AQ16665 826 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 NADK2Q4G0N4 442 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 HP1BP3Q5SSJ5 553 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PAPD7Q5XG87 772 aaKnown RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 KIAA0408Q6ZU52 694 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 COX15Q7KZN9 410 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PPP1R32Q7Z5V6 425 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PAQR7Q86WK9 346 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 OR4N4Q8N0Y3 316 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CSNK1A1LQ8N752 337 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 GPATCH11Q8N954 259 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CPT1CQ8TCG5 803 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 MCOLN3Q8TDD5 553 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ASB11Q8WXH4 323 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 TM9SF4Q92544 642 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 MIEF2Q96C03 454 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 LINGO1Q96FE5 620 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 SNF8Q96H20 258 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PLCD4Q9BRC7 762 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 TRIM51Q9BSJ1 452 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CRB3Q9BUF7 120 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 TRIM31Q9BZY9 425 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 MLXIPLQ9NP71 852 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ATP13A2Q9NQ11 1180 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CCDC177Q9NQR7 707 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 SLC22A11Q9NSA0 550 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CTSFQ9UBX1 484 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ZNF282Q9UDV7 671 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 VPS4AQ9UN37 437 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 CDC14AQ9UNH5 594 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 PLAAQ9Y263 795 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 MED16Q9Y2X0 877 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 HEATR5BQ9P2D3 2071 aa10.38□□□□□ -0.75
HMGN1P35-201ENST00000303758 ANKRD12Q6UB98 2062 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 GFYI3L273 518 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 TXNDC9O14530 226 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 NDC80O14777 642 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 SEC16AO15027 2179 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 TTI1O43156 1089 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 IPO13O94829 963 aaKnown RBP10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 ANXA5P08758 320 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 MMP11P24347 488 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 IMPA1P29218 277 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 SKIV2L2P42285 1042 aaKnown RBP10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 ITGA8P53708 1063 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 TBPL1P62380 186 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 AIMP2Q13155 320 aaKnown RBP10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 SP140Q13342 867 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 MYBPC3Q14896 1274 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 TUBB8Q3ZCM7 444 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 RBM20Q5T481 1227 aaKnown RBP10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 PRAMEF13Q5VWM6 474 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 FAM45BPQ6NSW5 357 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 CREG2Q8IUH2 290 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 CNTN4Q8IWV2 1026 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 PRSS58Q8IYP2 241 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 DTWD1Q8N5C7 304 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 FAM45AQ8TCE6 357 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 EEF1AKMT1Q8WVE0 214 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 MIB2Q96AX9 1013 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 NACC2Q96BF6 587 aa10.37□□□□□ -0.75
HMGN1P35-201ENST00000303758 ALKBH8Q96BT7 664 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms