RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF598Q86UK7 904 aaKnown RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GPAT4Q86UL3 456 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PHTF2Q8N3S3 785 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 OXR1Q8N573 874 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 NCSTNQ92542 709 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 COL21A1Q96P44 957 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 NEDD4LQ96PU5 975 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SLC39A1Q9NY26 324 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 AGPSO00116 658 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PCDH7O60245 1069 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 RCBTB2O95199 551 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 LATS1O95835 1130 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 CSNK2A2P19784 350 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GSTM3P21266 225 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 LCN1P31025 176 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 MAGEA3P43357 314 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SP3Q02447 781 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 DDR1Q08345 913 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 LRRC32Q14392 662 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 UBXN2BQ14CS0 331 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PLEKHG6Q3KR16 790 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 LIN37Q96GY3 246 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 C7orf26Q96N11 449 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 FZD3Q9NPG1 666 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GNG8Q9UK08 70 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 A0A0G2JN53 185 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 FBP2O00757 339 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 BCAS1O75363 584 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 AGR2O95994 175 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 MT-CYBP00156 380 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 GOT2P00505 430 aaKnown RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 PEX2P28328 305 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 CTHP32929 405 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 GRIA1P42261 906 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 CRISP1P54107 249 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 NIPAL4Q0D2K0 466 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 NOMO1Q15155 1222 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 INAVAQ3KP66 663 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 VSTM1Q6UX27 236 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 MBOAT1Q6ZNC8 495 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 C7orf57Q8NEG2 295 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 TTLQ8NG68 377 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 S100A16Q96FQ6 103 aaKnown RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 KCNC2Q96PR1 638 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 LENG8Q96PV6 779 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 CSPG4P5Q96PW8 444 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 IL4I1Q96RQ9 567 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 WDR77Q9BQA1 342 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 GBA3Q9H227 469 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 CCSER2Q9H7U1 834 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 LRRC4CQ9HCJ2 640 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 P2RX2Q9UBL9 471 aa10.15□□□□□ -0.79
CLIP1-201ENST00000302528 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 ZFP37Q9Y6Q3 630 aaPredicted RBP10.15□□□□□ -0.79
CLIP1-201ENST00000302528 H7C417 338 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 MFSD11O43934 449 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PEX14O75381 377 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 IFNA4P05014 189 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SFTPBP07988 381 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 YBEYP58557 167 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NCEH1Q6PIU2 408 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NUDT13Q86X67 352 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 OR5B17Q8NGF7 314 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SLC22A18Q96BI1 424 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 TAS2R10Q9NYW0 307 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF225Q9UK10 706 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PCDHGC4Q9Y5F7 938 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PCDHGA6Q9Y5G7 932 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PON3Q15166 354 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 DPY19L1Q2PZI1 675 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NKAPLQ5M9Q1 402 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PHF19Q5T6S3 580 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF517Q6ZMY9 492 aaPredicted RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SLC51AQ86UW1 340 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 KLK6Q92876 244 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 KCNN1Q92952 543 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 LRRC46Q96FV0 321 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 MTERF1Q99551 399 aaKnown RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ORAI3Q9BRQ5 295 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 METTL7AQ9H8H3 244 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF446Q9NWS9 450 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SLC15A5A6NIM6 579 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NOTOA8MTQ0 251 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 CCL22O00626 93 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 INSIG1O15503 277 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 RAD51DO75771 328 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 HTR1AP08908 422 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 POLR2HP52434 150 aaKnown RBP10.14□□□□□ -0.79
CLIP1-201ENST00000302528 INHBEP58166 350 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 PLP2Q04941 152 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 DSC3Q14574 896 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 SH3D19Q5HYK7 790 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 NOXRED1Q6NXP6 359 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 OR4C15Q8NGM1 316 aa10.14□□□□□ -0.79
CLIP1-201ENST00000302528 OR8S1Q8NH09 359 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms