RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TAF10Q12962 218 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ASCC1Q8N9N2 400 aaKnown RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 HIST1H2AAQ96QV6 131 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 AKTIPQ9H8T0 292 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MRPS14O60783 128 aaKnown RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ANXA3P12429 323 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 PGAM2P15259 253 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 IRF9Q00978 393 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 RPL6Q02878 288 aaKnown RBP7.46□□□□□ -1.22
SF3B3-201ENST00000302516 CTC1Q2NKJ3 1217 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 COQ5Q5HYK3 327 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 BRAT1Q6PJG6 821 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MCEMP1Q8IX19 187 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 FIBCD1Q8N539 461 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 MYNNQ9NPC7 610 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 TVP23BQ9NYZ1 205 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 DTLQ9NZJ0 730 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 FZD4Q9ULV1 537 aa7.46□□□□□ -1.22
SF3B3-201ENST00000302516 ELOA3DA6NLF2 546 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CAPN14A8MX76 684 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 I3L521 148 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ECI2O75521 394 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PTTG1O95997 202 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 XRCC1P18887 633 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 BEX3Q00994 111 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ELOA3BQ3SY89 546 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 C9orf131Q5VYM1 1079 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HACD2Q6Y1H2 254 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 C1orf127Q8N9H9 656 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ELOA3Q8NG57 546 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SLC7A6OSQ96CW6 309 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 METTL8Q9H825 291 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PCDH10Q9P2E7 1040 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 NKX1-2Q9UD57 310 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MSRAQ9UJ68 235 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MT-ND1P03886 318 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 IL7P13232 177 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 NT5EP21589 574 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 AGTR1P30556 359 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 AKT2P31751 481 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 WDR4P57081 412 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ACTC1P68032 377 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ACTA1P68133 377 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CD83Q01151 205 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ABHD18Q0P651 414 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HAGHLQ6PII5 290 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PAQR7Q86WK9 346 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ASPNQ9BXN1 380 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 UCK2Q9BZX2 261 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 TOR3AQ9H497 397 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MTHFD1P11586 935 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MYCLP1P12525 358 aaPredicted RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PRKCDQ05655 676 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 GXYLT1Q4G148 440 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 GHDCQ8N2G8 530 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 C7orf57Q8NEG2 295 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 OR6K6Q8NGW6 343 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 TBATAQ96M53 351 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SLC32A1Q9H598 525 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CCDC86Q9H6F5 360 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 TMEM45AQ9NWC5 275 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ABI3Q9P2A4 366 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MGAT4BQ9UQ53 548 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HES2Q9Y543 173 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SMCO3A2RU48 225 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CLIC1O00299 241 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PRKYO43930 277 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 EEDO75530 441 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CLUP10909 449 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HK1P19367 917 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 BNIP3Q12983 259 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 CDKL4Q5MAI5 379 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 UBE2Q1Q7Z7E8 422 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 DENND6BQ8NEG7 585 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 PROKR2Q8NFJ6 384 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ART5Q96L15 291 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 EBF4Q9BQW3 602 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HSD3B7Q9H2F3 369 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 MEAF6Q9HAF1 191 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 DMAC2Q9NW81 257 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 WASHC1A8K0Z3 465 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 WASH3PC4AMC7 463 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ADAMTS3O15072 1205 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 UGT2B10P36537 528 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 NRG3P56975 720 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 VLDLRP98155 873 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 EMX2Q04743 252 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 FADDQ13158 208 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 WASH2PQ6VEQ5 465 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SLC24A5Q71RS6 500 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ZC3HC1Q86WB0 502 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 ALDH16A1Q8IZ83 802 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SEC14L1Q92503 715 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 UPF1Q92900 1129 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 FKBP10Q96AY3 582 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 SLC45A3Q96JT2 553 aa7.45□□□□□ -1.22
SF3B3-201ENST00000302516 NTPCRQ9BSD7 190 aaKnown RBP7.45□□□□□ -1.22
SF3B3-201ENST00000302516 HCN3Q9P1Z3 774 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms