RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SLC5A11Q8WWX8 675 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 MRGPRX2Q96LB1 330 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 SENP8Q96LD8 212 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 TM9SF3Q9HD45 589 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ZNF112Q9UJU3 913 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 CDH23Q9H251 3354 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 A0A1W2PQL4 384 aaPredicted RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 SLC35F4A4IF30 521 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 YJEFN3A6XGL0 299 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 GPR39O43194 453 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 SLC22A5O76082 557 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 CDRT1O95170 752 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 MATN4O95460 622 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 HPRP00739 348 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 CSF3P09919 207 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 BMP1P13497 986 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 GDF5P43026 501 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 LCP2Q13094 533 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ANKS6Q68DC2 871 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 TMEM81Q6P7N7 255 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ANGPTL8Q6UXH0 198 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 TMIGD1Q6UXZ0 262 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 SVOPLQ8N434 492 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ZNF548Q8NEK5 533 aaPredicted RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 BEST4Q8NFU0 473 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 OR9Q1Q8NGQ5 310 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 GTPBP3Q969Y2 492 aaKnown RBP14.02□□□□□ -0.17
CDT1-201ENST00000301019 PCYT2Q99447 389 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 MGLLQ99685 303 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 INPP5KQ9BT40 448 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 RACGAP1Q9H0H5 632 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 LINC00597Q9H2U6 94 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ABHD16BQ9H3Z7 469 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 MS4A12Q9NXJ0 267 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 ING3Q9NXR8 418 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 AKT3Q9Y243 479 aa14.02□□□□□ -0.17
CDT1-201ENST00000301019 IQCF5A8MTL0 148 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 GTPBP1O00178 669 aaKnown RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 SLC9A3R1O14745 358 aaPredicted RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 PDE9AO76083 593 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 CD1DP15813 335 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 AKAP5P24588 427 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ZNF81P51508 661 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 EPHA5P54756 1037 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 NPRL3Q12980 569 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 SLC14A1Q13336 389 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 CAMK2GQ13555 558 aaPredicted RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 SLC25A52Q3SY17 297 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 OTUD1Q5VV17 481 aaPredicted RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 KIAA1614Q5VZ46 1190 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 BRAT1Q6PJG6 821 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 C17orf107Q6ZR85 190 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 Q6ZSR9 355 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 GPR65Q8IYL9 337 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 VWA5B2Q8N398 1253 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 OR13C4Q8NGS5 318 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ZNF431Q8TF32 576 aaPredicted RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 TTLL2Q9BWV7 592 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 RLIMQ9NVW2 624 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 PPIEQ9UNP9 301 aaKnown RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 YARS2Q9Y2Z4 477 aaKnown RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 GRIP1Q9Y3R0 1128 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ARL5AQ9Y689 179 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 LZTS3O60299 673 aaPredicted RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 RHOBTB1O94844 696 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 HLA-DQB2P05538 268 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 CSTF2P33240 577 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDT1-201ENST00000301019 OR1E2P47887 323 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ATP4BP51164 291 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ERVK-21P61565 698 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 HNRNPA0Q13151 305 aaKnown RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 SAXO2Q658L1 398 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 EFCAB12Q6NXP0 572 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ZNF598Q86UK7 904 aaKnown RBP14.01□□□□□ -0.17
CDT1-201ENST00000301019 ZNF680Q8NEM1 530 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 OR52E6Q96RD3 313 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 SEC22CQ9BRL7 303 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 ACTL8Q9H568 366 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 NT5MQ9NPB1 228 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 NRBP2Q9NSY0 501 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 CLEC2DQ9UHP7 191 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 V9GYH0 126 aa14.01□□□□□ -0.17
CDT1-201ENST00000301019 FAM234BA2RU67 622 aa14□□□□□ -0.17
CDT1-201ENST00000301019 FADS2P1A8MWK0 482 aa14□□□□□ -0.17
CDT1-201ENST00000301019 SLC16A6O15403 523 aa14□□□□□ -0.17
CDT1-201ENST00000301019 NBNO60934 754 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ECI2O75521 394 aa14□□□□□ -0.17
CDT1-201ENST00000301019 MSL3P1P0C860 447 aa14□□□□□ -0.17
CDT1-201ENST00000301019 CD86P42081 329 aa14□□□□□ -0.17
CDT1-201ENST00000301019 CSRP3P50461 194 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ELP6Q0PNE2 266 aa14□□□□□ -0.17
CDT1-201ENST00000301019 DGKKQ5KSL6 1271 aa14□□□□□ -0.17
CDT1-201ENST00000301019 IRAK1BP1Q5VVH5 260 aa14□□□□□ -0.17
CDT1-201ENST00000301019 PAQR6Q6TCH4 344 aa14□□□□□ -0.17
CDT1-201ENST00000301019 CCDC149Q6ZUS6 474 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ZFAND4Q86XD8 727 aa14□□□□□ -0.17
CDT1-201ENST00000301019 ATPAF2Q8N5M1 289 aa14□□□□□ -0.17
CDT1-201ENST00000301019 SYT14Q8NB59 555 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms