RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 TRAM1L1Q8N609 369 aa21.27■■□□□ 1
TPM4-201ENST00000300933 OR10Q1Q8NGQ4 319 aa21.27■■□□□ 1
TPM4-201ENST00000300933 OSCP1Q8WVF1 389 aa21.27■■□□□ 1
TPM4-201ENST00000300933 IFT80Q9P2H3 777 aaPredicted RBP21.27■■□□□ 1
TPM4-201ENST00000300933 FBXO10Q9UK96 956 aa21.27■■□□□ 1
TPM4-201ENST00000300933 ERGIC3Q9Y282 383 aa21.27■■□□□ 1
TPM4-201ENST00000300933 SPINT1O43278 529 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 CAPGP40121 348 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 NRIP1P48552 1158 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 PWP1Q13610 501 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 TRIM16LQ309B1 348 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 PLEKHS1Q5SXH7 462 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 C9orf50Q5SZB4 431 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 BTLAQ7Z6A9 289 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 IGFN1Q86VF2 1251 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 MSRB3Q8IXL7 192 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 DPP10Q8N608 796 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 HERVK_113Q902F9 699 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 INPP5KQ9BT40 448 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 E7EQ34 232 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 ZNF197O14709 1029 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 RASAL1O95294 804 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 CYP2U1Q7Z449 544 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 TRPV3Q8NET8 790 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 ARRDC3Q96B67 414 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 TMEM159Q96B96 161 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 ZNF583Q96ND8 569 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 ZSCAN5AQ9BUG6 496 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 DNAJC11Q9NVH1 559 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 SMPD3Q9NY59 655 aaPredicted RBP21.26■□□□□ 0.99
TPM4-201ENST00000300933 GULP1Q9UBP9 304 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 DGKBQ9Y6T7 804 aa21.26■□□□□ 0.99
TPM4-201ENST00000300933 KCNE1BA0A087WTH5 132 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 SLC9A3R1O14745 358 aaPredicted RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 SLC16A8O95907 504 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 HOXA9P31269 272 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 EEFSECP57772 596 aaKnown RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 XKR6Q5GH73 641 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 OTUD3Q5T2D3 398 aaPredicted RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 GCNT7Q6ZNI0 430 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 DPPA4Q7L190 304 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 TAMM41Q96BW9 452 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 OR2AG1Q9H205 316 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 IGFLR1Q9H665 355 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 UTS2RQ9UKP6 389 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 WNT9AO14904 365 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 IRF8Q02556 426 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 GPM6BQ13491 265 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 ERAP2Q6P179 960 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 GET4Q7L5D6 327 aaPredicted RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 PTRH1Q86Y79 214 aaKnown RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 SNX29P2Q8IUI4 249 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 TMCO5AQ8N6Q1 288 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 TRUB1Q8WWH5 349 aaKnown RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 OTUB2Q96DC9 234 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 NRTNQ99748 197 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 RMI1Q9H9A7 625 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 ANAPC2Q9UJX6 822 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 TSC22D4Q9Y3Q8 395 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 MAGED1Q9Y5V3 778 aaPredicted RBP21.25■□□□□ 0.99
TPM4-201ENST00000300933 DOCK9Q9BZ29 2069 aa21.25■□□□□ 0.99
TPM4-201ENST00000300933 HEPACAM2A8MVW5 462 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 ARNTLO00327 626 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 GSTT2P0CG29 244 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 GSTT2BP0CG30 244 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 RPS9P46781 194 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 RPS14P62263 151 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 PPP1R8Q12972 351 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 PERM1Q5SV97 790 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 LRRC70Q7Z2Q7 622 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 PLPP6Q8IY26 295 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CFAP206Q8IYR0 622 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 TERB1Q8NA31 727 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 FBXO30Q8TB52 745 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 FGF13Q92913 245 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CHID1Q9BWS9 393 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CARS2Q9HA77 564 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 DAPK2Q9UIK4 370 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 PPT2Q9UMR5 302 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CXorf51AA0A1B0GTR3 108 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 RECQL5O94762 991 aaPredicted RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 SLCO2B1O94956 709 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 ADH1CP00326 375 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 FTH1P02794 183 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CDKN2CP42773 168 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 TMTC4Q5T4D3 741 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 THOC6Q86W42 341 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 TRAPPC5Q8IUR0 188 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 MMAAQ8IVH4 418 aaKnown RBP21.24■□□□□ 0.99
TPM4-201ENST00000300933 NPAS3Q8IXF0 933 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 SGCDQ92629 289 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 NSMCE2Q96MF7 247 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 OR4K3Q96R72 315 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 CLMPQ9H6B4 373 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 SNX6Q9UNH7 406 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 PCDHB14Q9Y5E9 798 aa21.24■□□□□ 0.99
TPM4-201ENST00000300933 KRBA1A5PL33 1030 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 MPC1LP0DKB6 136 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 SDC1P18827 310 aa21.23■□□□□ 0.99
TPM4-201ENST00000300933 WASP42768 502 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms