RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 SLC46A3Q7Z3Q1 461 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 GPRC5AQ8NFJ5 357 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 WDR36Q8NI36 951 aaKnown RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 GPR151Q8TDV0 419 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ELOVL6Q9H5J4 265 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 IL1RAPQ9NPH3 570 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 COQ3Q9NZJ6 369 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 PSME4Q14997 1843 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 CLIC1O00299 241 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 RGS13O14921 159 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ADORA3P0DMS8 318 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ACVR2AP27037 513 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ZNF140P52738 457 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 GNG2P59768 71 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 FADDQ13158 208 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 IRF3Q14653 427 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 CDK10Q15131 360 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 CCDC85BQ15834 202 aaPredicted RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ZC3H12BQ5HYM0 836 aaKnown RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ATG9BQ674R7 924 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 LINC00299Q6ZSB3 139 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TTC9BQ8N6N2 239 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 ABCB9Q9NP78 766 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TOR4AQ9NXH8 423 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 MARCH2Q9P0N8 246 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 MUTYHQ9UIF7 546 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 SLC6A14Q9UN76 642 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 PCDHGA6Q9Y5G7 932 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 TNPO3Q9Y5L0 923 aaKnown RBP14.25□□□□□ -0.13
COL6A2-201ENST00000300527 LTBP3Q9NS15 1303 aa14.25□□□□□ -0.13
COL6A2-201ENST00000300527 OR6C70A6NIJ9 312 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 M0QZ92 97 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 IFRD1O00458 451 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 FPGTO14772 594 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 XKR4Q5GH76 650 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CLECL1Q8IZS7 167 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ATAD1Q8NBU5 361 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ACBD6Q9BR61 282 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CLPBQ9H078 707 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MAGIXQ9H6Y5 334 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 SPASTQ9UBP0 616 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MALT1Q9UDY8 824 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 PRG3Q9Y2Y8 225 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CCNDBP1O95273 360 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 KDELR2P33947 212 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 PIK3CBP42338 1070 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 NRIP1P48552 1158 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 RGS6P49758 472 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CDH12P55289 794 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 GNASQ5JWF2 1037 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 TUBA3EQ6PEY2 450 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ZNF438Q7Z4V0 828 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ADAMTSL2Q86TH1 951 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 UBQLNLQ8IYU4 475 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CLMPQ9H6B4 373 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 RLIMQ9NVW2 624 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 TMEM248Q9NWD8 314 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MS4A12Q9NXJ0 267 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 GABRQQ9UN88 632 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MEIOCA2RUB1 952 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 SLC28A1O00337 649 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MANBAO00462 879 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ICMTO60725 284 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ERN1O75460 977 aaKnown RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 SLC25A14O95258 325 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 CXCR4P61073 352 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 NKX3-2P78367 333 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ABHD18Q0P651 414 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 MAD2L1Q13257 205 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 STARD3Q14849 445 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 C16orf59Q7L2K0 433 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 REM2Q8IYK8 340 aaPredicted RBP14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ELMOD2Q8IZ81 293 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 IL4I1Q96RQ9 567 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 KATNAL1Q9BW62 490 aa14.24□□□□□ -0.13
COL6A2-201ENST00000300527 ALPIP09923 528 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 EPB42P16452 691 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 IFNA8P32881 189 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 KCNQ1P51787 676 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 RPS24P62847 133 aaKnown RBP14.23□□□□□ -0.13
COL6A2-201ENST00000300527 CDC42EP1Q00587 391 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 GALK2Q01415 458 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 ACVR1Q04771 509 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 SLC5A8Q8N695 610 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 LKAAEAR1Q8TD35 194 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 FBXO32Q969P5 355 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 ST6GAL2Q96JF0 529 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 RAI2Q9Y5P3 530 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 MAU2Q9Y6X3 613 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 CENPBD1B2RD01 187 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 H3BQ06 376 aaPredicted RBP14.23□□□□□ -0.13
COL6A2-201ENST00000300527 TNFRSF11BO00300 401 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 EPN2O95208 641 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 SNX4O95219 450 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 PDYNP01213 254 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 SOX3P41225 446 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 HNF4AP41235 474 aa14.23□□□□□ -0.13
COL6A2-201ENST00000300527 SPIBQ01892 262 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms