RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 DEFB123Q8N688 67 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 TTC29Q8NA56 475 aaPredicted RBP9.88□□□□□ -0.83
GABRB3-201ENST00000299267 THAP11Q96EK4 314 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 PKMYT1Q99640 499 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 SLC24A3Q9HC58 644 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 SUFUQ9UMX1 484 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 C15orf41Q9Y2V0 281 aa9.88□□□□□ -0.83
GABRB3-201ENST00000299267 SIPA1L1O43166 1804 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SCN4AP35499 1836 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 GTPBP1O00178 669 aaKnown RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 PDYNP01213 254 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 EBLN1P0CF75 366 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 CTHP32929 405 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 P2RY2P41231 377 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 DEFB110Q30KQ9 67 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 TMEM214Q6NUQ4 689 aaKnown RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 Q6ZSR6 202 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 HMGN2P46Q86SG4 172 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 TRIM73Q86UV7 250 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SLC22A15Q8IZD6 547 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 PQLC1Q8N2U9 271 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 KAT2AQ92830 837 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 C9orf16Q9BUW7 83 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 RAD21L1Q9H4I0 556 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ARMC7Q9H6L4 198 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ARFGEF1Q9Y6D6 1849 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SHROOM3Q8TF72 1996 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 BBIP1A8MTZ0 92 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 CLDN4O14493 209 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 CACNG3O60359 315 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 PFKLP17858 780 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 NCBP2P52298 156 aaKnown RBP eCLIP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 DGCR6Q14129 220 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SIM2Q14190 667 aaPredicted RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 DEFB134Q4QY38 66 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 CATSPEREQ5SY80 951 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 RNF175Q8N4F7 328 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 BPIFB6Q8NFQ5 453 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 DLG3Q92796 817 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 DNASE1L2Q92874 299 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ISG20Q96AZ6 181 aaKnown RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SLC22A18Q96BI1 424 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 RPS6KA6Q9UK32 745 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ACSL5Q9ULC5 683 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SLC9A8Q9Y2E8 581 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 MATN4O95460 622 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 PGRP06401 933 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 HOXC13P31276 330 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ETV4P43268 484 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 CCR3P51677 355 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ERVPABLB-1P60509 514 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 PTSQ03393 145 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 TRIM25Q14258 630 aaKnown RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 IRAK1BP1Q5VVH5 260 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 BHLHA9Q7RTU4 235 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 C12orf40Q86WS4 652 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 TEX26Q8N6G2 289 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ATP6V1C2Q8NEY4 427 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 RHEBL1Q8TAI7 183 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 WDR60Q8WVS4 1066 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 LRTOMTQ8WZ04 291 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 GLMNQ92990 594 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 TGM7Q96PF1 710 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 REXO4Q9GZR2 422 aaKnown RBP9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SLC2A4RGQ9NR83 387 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 MAP10Q9P2G4 905 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ADAMTS6Q9UKP5 1117 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 SARDHQ9UL12 918 aa9.87□□□□□ -0.83
GABRB3-201ENST00000299267 ENO4A6NNW6 628 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 STX16O14662 325 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 SCN2BO60939 215 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 SERPINB7O75635 380 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 CLPTM1O96005 669 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 C1SP09871 688 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 ITGAXP20702 1163 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 LHCGRP22888 699 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 NDUFS1P28331 727 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 VSX2P58304 361 aaPredicted RBP9.86□□□□□ -0.83
GABRB3-201ENST00000299267 BNIP2Q12982 314 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 GPNMBQ14956 572 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 ZNF77Q15935 545 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 NDUFA9Q16795 377 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 FBXO43Q4G163 708 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 LACTB2Q53H82 288 aaPredicted RBP9.86□□□□□ -0.83
GABRB3-201ENST00000299267 TOR1AIP1Q5JTV8 583 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 VN1R2Q8NFZ6 395 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 LKAAEAR1Q8TD35 194 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 LRRC58Q96CX6 371 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 DTD2Q96FN9 168 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 CPEB1Q9BZB8 566 aaKnown RBP9.86□□□□□ -0.83
GABRB3-201ENST00000299267 SEMA3GQ9NS98 782 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 MAPRE3Q9UPY8 281 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 FAM234BA2RU67 622 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 CLIC1O00299 241 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 GNB5O14775 395 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 B3GALT2O43825 422 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 VEGFDO43915 354 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 PGM3O95394 542 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 EGFP01133 1207 aa9.86□□□□□ -0.83
GABRB3-201ENST00000299267 PSMB9P28065 219 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms