RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 LTBP4Q8N2S1 1624 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ARCN1P48444 511 aaKnown RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 KHKP50053 298 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 CLCNKBP51801 687 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 TXNL4AP83876 142 aaKnown RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 MSANTD2Q6P1R3 559 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 CIR1Q86X95 450 aaPredicted RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 SLC2A6Q9UGQ3 507 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 DOT1LQ8TEK3 1739 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 PRAMEF12O95522 483 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ALDOAP04075 364 aaKnown RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ANKRD13BQ86YJ7 626 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 LRRC15Q8TF66 581 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF384Q8TF68 577 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 BORCS6Q96GS4 357 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 HSH2DQ96JZ2 352 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 BARD1Q99728 777 aaKnown RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 COMMD4Q9H0A8 199 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 PAK1IP1Q9NWT1 392 aaPredicted RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 MARK1Q9P0L2 795 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 COL2A1P02458 1487 aaPredicted RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 KANTRA0A1W2PQU2 76 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 PPP2R2DQ66LE6 453 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 TMIEQ8NEW7 156 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 LMO3Q8TAP4 145 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 CCDC107Q8WV48 283 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 BCO2Q9BYV7 579 aa16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF487B1APH4 448 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 H1F0P07305 194 aaKnown RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 RPS3AP61247 264 aaKnown RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 RBBP4Q09028 425 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF678Q5SXM1 525 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 FAM182AQ5T1J6 154 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 KIAA1161Q6NSJ0 714 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SNX20Q7Z614 316 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 PRR11Q96HE9 360 aaPredicted RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SPACA7Q96KW9 195 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 IFT27Q9BW83 186 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 BRINP2Q9C0B6 783 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 GPR88Q9GZN0 384 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SPATA7Q9P0W8 599 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 FNIP2Q9P278 1114 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 ERVK-11Q9UQG0 969 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 C4BP0C0L5 1744 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 CBX5P45973 191 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 GJA9P57773 515 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 BTBD16Q32M84 506 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 PIM3Q86V86 326 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 PHYKPLQ8IUZ5 450 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 LINC00471Q8N535 108 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 C15orf40Q8WUR7 153 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 OR8D1Q8WZ84 308 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 GATA6Q92908 595 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 TMEM246Q9BRR3 403 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 UCK2Q9BZX2 261 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 CST11Q9H112 138 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 FARSBQ9NSD9 589 aaKnown RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 OR2AT4A6NND4 320 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 TEX46H3BTG2 121 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 L7N2F9 121 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 OPN1SWP03999 348 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 RPS3P23396 243 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 RBM34P42696 430 aaKnown RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF792Q3KQV3 632 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 CLEC20AQ6ZU45 233 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 TXNDC5Q8NBS9 432 aaKnown RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 ZMIZ2Q8NF64 920 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF563Q8TA94 476 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 C1orf216Q8TAB5 229 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 DNAJA4Q8WW22 397 aaPredicted RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 KIAA1191Q96A73 305 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SAMD11Q96NU1 681 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 DERL2Q9GZP9 239 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 TIGARQ9NQ88 270 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 POLE4Q9NR33 117 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SNAPC5O75971 98 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 GRIA2P42262 883 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SLC9A3P48764 834 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 DNASE1L1P49184 302 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SLC35G1Q2M3R5 365 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 NANOGP8Q6NSW7 305 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SLC39A4Q6P5W5 647 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 CADM2Q8N3J6 435 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 C2orf73Q8N5S3 287 aaPredicted RBP16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 OR4F6Q8NGB9 312 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 SLC35A5Q9BS91 424 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 WACQ9BTA9 647 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 NANOGQ9H9S0 305 aa16.05■□□□□ 0.16
SNAPC4-201ENST00000298532 TRBC2A0A5B9 178 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 CTSEP14091 401 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 AMD1P17707 334 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 DSTNP60981 165 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 GPR33Q49SQ1 333 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 ATP13A5Q4VNC0 1218 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 QSOX2Q6ZRP7 698 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 GALNT6Q8NCL4 622 aa16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF296Q8WUU4 475 aaPredicted RBP16.04■□□□□ 0.16
SNAPC4-201ENST00000298532 ZNF599Q96NL3 588 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms