RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 LCP2Q13094 533 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 NFATC2Q13469 925 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 CDONQ4KMG0 1287 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 RCBTB1Q8NDN9 531 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 LPPQ93052 612 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 CSPG4P5Q96PW8 444 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ARL8BQ9NVJ2 186 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 PPRC1Q5VV67 1664 aaKnown RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 CCNE2O96020 404 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 MFSD5Q6N075 450 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ZNF773Q6PK81 442 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ARHGAP12Q8IWW6 846 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 YIPF7Q8N8F6 280 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 OR5B17Q8NGF7 314 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 AZIN2Q96A70 460 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 DNTTIP1Q9H147 329 aa11.8□□□□□ -0.52
PCF11-201ENST00000298281 THUMPD1Q9NXG2 353 aaKnown RBP11.8□□□□□ -0.52
PCF11-201ENST00000298281 CLDN5O00501 218 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TNFP01375 233 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C1QTNF8P60827 252 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 BLMHQ13867 455 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 SLC5A9Q2M3M2 681 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ARHGAP40Q5TG30 622 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 LRRC66Q68CR7 880 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 NATD1Q8N6N6 113 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ROPN1LQ96C74 230 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TAS2R7Q9NYW3 318 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 KNTC1P50748 2209 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 EFCAB9A8MZ26 197 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 STK17BO94768 372 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 STBD1O95210 358 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 CALCAP01258 141 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TNFSF9P41273 254 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 KLF10Q13118 480 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 DPY19L1Q2PZI1 675 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 UBE2UQ5VVX9 321 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 AADACL2Q6P093 401 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C7orf57Q8NEG2 295 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 DENND2DQ9H6A0 471 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 MRPS30Q9NP92 439 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 PCDHGA11Q9Y5H2 935 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 FER1L4A9Z1Z3 1794 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ORC5O43913 435 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 UGT2B4P06133 528 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ANXA4P09525 319 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 PSPHP78330 225 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ERN2Q76MJ5 926 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C2orf15Q8WU43 125 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 COPS5Q92905 334 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C7orf26Q96N11 449 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 GORASP1Q9BQQ3 440 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 RGCCQ9H4X1 137 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 PCDHGA8Q9Y5G5 932 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ZNF705EA8MWA4 302 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 CCNFP41002 786 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TSFMP43897 325 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 NDST2P52849 883 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 POGLUT1Q8NBL1 392 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TTLQ8NG68 377 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C22orf15Q8WYQ4 148 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 PFDN5Q99471 154 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 CMKLR1Q99788 373 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 PDCD1LG2Q9BQ51 273 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 PAPOLGQ9BWT3 736 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 SMPD3Q9NY59 655 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 AGLP35573 1532 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 PIK3C2BO00750 1634 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TRMUO75648 421 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 SELPP16109 830 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ICAM3P32942 547 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 GSTM4Q03013 218 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 USP30Q70CQ3 517 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 ELMOD2Q8IZ81 293 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 JUNP05412 331 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 TAL1P17542 331 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 ZNF619Q8N2I2 560 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 TWIST2Q8WVJ9 160 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 HMGB4Q8WW32 186 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 BSCL2Q96G97 398 aaPredicted RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 ZNF347Q96SE7 839 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 HERPUD2Q9BSE4 406 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 C14orf105Q9NVL8 296 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 DNAAF2Q9NVR5 837 aaKnown RBP11.79□□□□□ -0.52
PCF11-201ENST00000298281 ERCC6L2Q5T890 1561 aa11.79□□□□□ -0.52
PCF11-201ENST00000298281 A0A1W2PQH9 124 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 POU2F1P14859 743 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 GNG2P59768 71 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 MPPED2Q15777 294 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 NTRK2Q16620 822 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 ZNF598Q86UK7 904 aaKnown RBP11.78□□□□□ -0.52
PCF11-201ENST00000298281 PPM1MQ96MI6 270 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 USP29Q9HBJ7 922 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 FXYD6-FXYD2A0A087WZ82 144 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
PCF11-201ENST00000298281 E7ENX8 843 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms