RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 PTSQ03393 145 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 C6orf136Q5SQH8 315 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 FAM20CQ8IXL6 584 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 SUN5Q8TC36 379 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 BIRC8Q96P09 236 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ZNF347Q96SE7 839 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 PDLIM7Q9NR12 457 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 C1orf109Q9NX04 203 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ZNF780BQ9Y6R6 833 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 LEFTY2O00292 366 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 C9P02748 559 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 VARSP26640 1264 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 HLCSP50747 726 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 IRF5Q13568 498 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 MZT2BQ6NZ67 158 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 C14orf80Q86SX3 495 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 AMZ2Q86W34 360 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 SVOPLQ8N434 492 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 OR4F6Q8NGB9 312 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ZUFSPQ96AP4 578 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 EQTNQ9NQ60 294 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 PTGFRNQ9P2B2 879 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 TCEA1P23193 301 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 VIPR2P41587 438 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 FOXA1P55317 472 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ARPC4P59998 168 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 LRRC32Q14392 662 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 CPTPQ5TA50 214 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 OR4F3Q6IEY1 312 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 SCML4Q8N228 414 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 DPP10Q8N608 796 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 C2CD4AQ8NCU7 369 aaPredicted RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 KAT2AQ92830 837 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 TP53INP1Q96A56 240 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 NARS2Q96I59 477 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 ANKRD60Q9BZ19 345 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 BRINP2Q9C0B6 783 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 UCKL1Q9NWZ5 548 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 CPNE3O75131 537 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 RASAL1O95294 804 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 RPLP0P05388 317 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 NTHL1P78549 312 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 TYSND1Q2T9J0 566 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ZNF776Q68DI1 518 aaPredicted RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 C11orf88Q6PI97 169 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 POMZP3Q6PJE2 187 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 GDPD4Q6W3E5 623 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 ZNF534Q76KX8 674 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
HPS3-201ENST00000296051 MRPL39Q9NYK5 338 aaKnown RBP13.09□□□□□ -0.31
HPS3-201ENST00000296051 PRSS51A0A1B0GVH4 220 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 TSPAN9O75954 239 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 NR2F6P10588 404 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 ZNF8P17098 575 aaPredicted RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 CDKN2DP55273 166 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 FAM189BP81408 668 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CACNG1Q06432 222 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CCINQ13939 588 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 NDUFA9Q16795 377 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 ZNF404Q494X3 552 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 DCDC5Q6ZRR9 648 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 IGFN1Q86VF2 1251 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 STARD8Q92502 1023 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 P2RY13Q9BPV8 354 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 OSBPL10Q9BXB5 764 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 TRIT1Q9H3H1 467 aaKnown RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 SGK2Q9HBY8 427 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 TIGARQ9NQ88 270 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 FLRT1Q9NZU1 646 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 COMMD3Q9UBI1 195 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 MMP20O60882 483 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CREG1O75629 220 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CLDN9O95484 217 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 AGXTP21549 392 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 DDX6P26196 483 aaKnown RBP eCLIP13.08□□□□□ -0.32
HPS3-201ENST00000296051 OLR1P78380 273 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 IL18Q14116 193 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CYP27C1Q4G0S4 372 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 OR2AP1Q8NGE2 309 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 FRS2Q8WU20 508 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 RAD51AP1Q96B01 352 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 RTP4Q96DX8 246 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 ZNF597Q96LX8 424 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 SFXN1Q9H9B4 322 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 GMFGO60234 142 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 PGRP06401 933 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 C8BP07358 591 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 ALPIP09923 528 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 GSTT2P0CG29 244 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 GSTT2BP0CG30 244 aa13.08□□□□□ -0.32
HPS3-201ENST00000296051 CD68P34810 354 aaPredicted RBP13.08□□□□□ -0.32
HPS3-201ENST00000296051 HTR7P34969 479 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms