RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 IQCMA0A1B0GVH7 501 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 METTL21EPA6NDL7 271 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 H3BNH8 94 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ARPC2O15144 300 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 NOBOXO60393 691 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 NME6O75414 186 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 BCAS2O75934 225 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 SAGP10523 405 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ITGA3P26006 1051 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RPIAP49247 311 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 AP1S2P56377 157 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 EIF5AP63241 154 aaKnown RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RIPPLY1Q0D2K3 151 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 CBLBQ13191 982 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMEM198Q66K66 360 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ERMP1Q7Z2K6 904 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ARL14EPQ8N8R7 260 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 PIGXQ8TBF5 258 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RTP3Q9BQQ7 232 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 RSPH9Q9H1X1 276 aaPredicted RBP11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMEM27Q9HBJ8 222 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 HCFC1R1Q9NWW0 138 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 ACTR3BQ9P1U1 418 aa11.55□□□□□ -0.56
SYNGAP1-201ENST00000293748 A0A1W2PQ67 120 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 J3QRK9 145 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 GADD45GO95257 159 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLK3P49761 638 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 MTPNP58546 118 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TPRG1LQ5T0D9 272 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CMTM8Q8IZV2 173 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SPAG16Q8N0X2 631 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SRFBP1Q8NEF9 429 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SNX33Q8WV41 574 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 FBXL8Q96CD0 374 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 OTUB2Q96DC9 234 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 PKP2Q99959 881 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TFB2MQ9H5Q4 396 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 DUS2Q9NX74 493 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 DTLQ9NZJ0 730 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CALML5Q9NZT1 146 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 IKZF2Q9UKS7 526 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 RUVBL1Q9Y265 456 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 NCKAP1Q9Y2A7 1128 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 C1QTNF3-AMACRE9PGA6 284 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 MID1O15344 667 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CEBPBP17676 345 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 IMPDH1P20839 514 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CLCN2P51788 898 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 WSCD2Q2TBF2 565 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SPATS1Q496A3 300 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF613Q6PF04 617 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMEM130Q8N3G9 435 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 GTPBP3Q969Y2 492 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 LRRC58Q96CX6 371 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TWNKQ96RR1 684 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 NELL2Q99435 816 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SMOQ99835 787 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TTLL2Q9BWV7 592 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 C8orf33Q9H7E9 229 aaPredicted RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 PCDHGA3Q9Y5H0 932 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 RAI2Q9Y5P3 530 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 FAM159BA6NKW6 160 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 NOTOA8MTQ0 251 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TEX46H3BTG2 121 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 GTPBP1O00178 669 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SCAMP3O14828 347 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 MAGEB3O15480 346 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 DNTTP04053 509 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 PSKH1P11801 424 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 GJA1P17302 382 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TMPRSS11BQ86T26 416 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 DCBLD1Q8N8Z6 715 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 SPATA22Q8NHS9 363 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TFAP2BQ92481 460 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CFAP97Q9P2B7 532 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 EIF2B4Q9UI10 523 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 MRPS33Q9Y291 106 aaKnown RBP11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 CPQQ9Y646 472 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 NFS1Q9Y697 457 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 RALGAPA2Q2PPJ7 1873 aa11.54□□□□□ -0.56
SYNGAP1-201ENST00000293748 KLHL33A6NCF5 533 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PRODHO43272 600 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 HCRTO43612 131 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SPAM1P38567 509 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PTGER3P43115 390 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 KCNQ1P51787 676 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 PCDH1Q08174 1060 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 SYT16Q17RD7 645 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF311Q5JNZ3 666 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF773Q6PK81 442 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ZNF517Q6ZMY9 492 aaPredicted RBP11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ADGRG6Q86SQ4 1221 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 AZIN2Q96A70 460 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CXorf40BQ96DE9 158 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 ART5Q96L15 291 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 CCDC115Q96NT0 180 aa11.53□□□□□ -0.56
SYNGAP1-201ENST00000293748 COMMD3Q9UBI1 195 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms