RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 NPRL3Q12980 569 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 ERICH5Q6P6B1 374 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 TTC23LQ6PF05 361 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 ZNF621Q6ZSS3 439 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 EIF3MQ7L2H7 374 aaKnown RBP18.62■□□□□ 0.57
LSM12-201ENST00000293406 FBXO22Q8NEZ5 403 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 PYCR2Q96C36 320 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 TTPALQ9BTX7 342 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 ANKHQ9HCJ1 492 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 SCHIP1Q9P0W5 487 aaPredicted RBP18.62■□□□□ 0.57
LSM12-201ENST00000293406 ZNF229Q9UJW7 825 aa18.62■□□□□ 0.57
LSM12-201ENST00000293406 GKP32189 559 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 HOXD12P35452 270 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 PPP3CCP48454 512 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 CLK1P49759 484 aaKnown RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 ELAVL2Q12926 359 aaKnown RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 MTAPQ13126 283 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 CDKL4Q5MAI5 379 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 NOXRED1Q6NXP6 359 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 UBE2R2Q712K3 238 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 CBLL1Q75N03 491 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 PITX2Q99697 317 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 ITPAQ9BY32 194 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 DCSTAMPQ9H295 470 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 OR51B4Q9Y5P0 310 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 PCSK2P16519 638 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 AMD1P17707 334 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 PRPS1L1P21108 318 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 CCND3P30281 292 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 NSG1P42857 185 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 TUFMP49411 452 aaKnown RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 ZNF157P51786 506 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 ITGA1P56199 1179 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 BOP1Q14137 746 aaKnown RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 CDKN3Q16667 212 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 ZXDCQ2QGD7 858 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 UBE2UQ5VVX9 321 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 FAHD1Q6P587 224 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 TMEM173Q86WV6 379 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 PTOV1Q86YD1 416 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 IFNL1Q8IU54 200 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 PCSK9Q8NBP7 692 aaKnown RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 SIGLEC11Q96RL6 698 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 C19orf43Q9BQ61 176 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 SYT17Q9BSW7 474 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 KLF16Q9BXK1 252 aaPredicted RBP18.61■□□□□ 0.57
LSM12-201ENST00000293406 EBPLQ9BY08 206 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 SIRT5Q9NXA8 310 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 ANKMY1Q9P2S6 941 aa18.61■□□□□ 0.57
LSM12-201ENST00000293406 C2orf78A6NCI8 922 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 MAGEB17A8MXT2 336 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 GPX2P18283 190 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 ALDH7A1P49419 539 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 ABRQ12979 859 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 CAMK2GQ13555 558 aaPredicted RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 SYT16Q17RD7 645 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 ARMC8Q8IUR7 673 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 SYT12Q8IV01 421 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 ENTHD1Q8IYW4 607 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 CSGALNACT1Q8TDX6 532 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 SKA2Q8WVK7 121 aaPredicted RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 APH1BQ8WW43 257 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 SLC38A4Q969I6 547 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 DPH2Q9BQC3 489 aaPredicted RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 PCDHB7Q9Y5E2 793 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 SMAD6O43541 496 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 C9P02748 559 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 HMGA1P17096 107 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 RPL17P18621 184 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 SERPINB1P30740 379 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 EIF2DP41214 584 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 CDH18Q13634 790 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 PDE12Q6L8Q7 609 aaKnown RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 TPGS1Q6ZTW0 290 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 P3H2Q8IVL5 708 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 TCAIMQ8N3R3 496 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 BHMTQ93088 406 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 TPD52L3Q96J77 140 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 CASD1Q96PB1 797 aa18.6■□□□□ 0.57
LSM12-201ENST00000293406 ZBTB20Q9HC78 741 aaPredicted RBP18.6■□□□□ 0.57
LSM12-201ENST00000293406 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.6■□□□□ 0.57
LSM12-201ENST00000293406 MYO1DO94832 1006 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 CPSF4O95639 269 aaKnown RBP18.59■□□□□ 0.57
LSM12-201ENST00000293406 HIST1H2AGP0C0S8 130 aaPredicted RBP18.59■□□□□ 0.57
LSM12-201ENST00000293406 HIST1H2ADP20671 130 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 CCR7P32248 378 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 FLT3LGP49771 235 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 CSNK2BP67870 215 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 TUBA1BP68363 451 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 SRSF11Q05519 484 aaKnown RBP18.59■□□□□ 0.57
LSM12-201ENST00000293406 PTCHD3Q3KNS1 767 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 FRG2Q64ET8 278 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 NEK5Q6P3R8 708 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 TUBA1AQ71U36 451 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 LACC1Q8IV20 430 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 SCAIQ8N9R8 606 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 L3MBTL4Q8NA19 623 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 DCAF4L2Q8NA75 395 aa18.59■□□□□ 0.57
LSM12-201ENST00000293406 WFDC5Q8TCV5 224 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms