RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MPC1LP0DKB6 136 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ACP5P13686 325 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ALDH3A2P51648 485 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 NPTX1Q15818 432 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 SLC2A7Q6PXP3 512 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 Q6ZVU0 165 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 NXPE1Q8N323 547 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ENDOVQ8N8Q3 282 aaKnown RBP12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF527Q8NB42 609 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 BPIFB1Q8TDL5 484 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 FAM210AQ96ND0 272 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 EHD1Q9H4M9 534 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 DAPL1A0PJW8 107 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 HCRTO43612 131 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 CNTN5O94779 1100 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 PGLSO95336 258 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 PRKCGP05129 697 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 CD2P06729 351 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ACRP10323 421 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ACVR2AP27037 513 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ACADVLP49748 655 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 CDK6Q00534 326 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 LRRC73Q5JTD7 316 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 AGTRAPQ6RW13 159 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 RNF19BQ6ZMZ0 732 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 LRCH3Q96II8 777 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 ELOVL2Q9NXB9 296 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 PPM1HQ9ULR3 514 aa12.46□□□□□ -0.42
PTCD1-201ENST00000292478 CREG1O75629 220 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 RLN1P04808 185 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MASP1P48740 699 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PPP2R2BQ00005 443 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 STEAP4Q687X5 459 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 SERINC5Q86VE9 423 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PDSS2Q86YH6 399 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 DCUN1D3Q8IWE4 304 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 WDTC1Q8N5D0 677 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 STON2Q8WXE9 905 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 COL21A1Q96P44 957 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 TM9SF3Q9HD45 589 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 ABCB9Q9NP78 766 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PCDHB11Q9Y5F2 797 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PRSS51A0A1B0GVH4 220 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 GSRP00390 522 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 FESP07332 822 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF823P16415 610 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 CKMT2P17540 419 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MAT2AP31153 395 aaKnown RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 CLCN7P51798 805 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 C1orf220Q5T0J3 134 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 ENPP7Q6UWV6 458 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MMAAQ8IVH4 418 aaKnown RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MCEMP1Q8IX19 187 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PHTF2Q8N3S3 785 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 OR10H4Q8NGA5 316 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 STRA6Q9BX79 667 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 KIF13AQ9H1H9 1805 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 ORC5O43913 435 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 EFNA1P20827 205 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PTCHD3Q3KNS1 767 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 GALNT15Q8N3T1 639 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 OR9A1PQ8NGU1 263 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 FIZ1Q96SL8 496 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MED28Q9H204 178 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 TRBC2A0A5B9 178 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 LEFTY2O00292 366 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 CHRNA1P02708 482 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 KLK1P06870 262 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 TACSTD2P09758 323 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 G6PDP11413 515 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 CD36P16671 472 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 SMSP52788 366 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 LIPJQ5W064 366 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 TFGQ92734 400 aaPredicted RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MOAP1Q96BY2 351 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 PKP2Q99959 881 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
PTCD1-201ENST00000292478 CDH7Q9ULB5 785 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 KCTD3Q9Y597 815 aa12.45□□□□□ -0.42
PTCD1-201ENST00000292478 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TRIM3O75382 744 aaPredicted RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 RCBTB2O95199 551 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TYRP14679 529 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 DGKQP52824 942 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GBX2P52951 348 aaPredicted RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TUBA1BP68363 451 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 UBAP2Q5T6F2 1119 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 GPRC6AQ5T6X5 926 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 OR8J3Q8NGG0 315 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 TRMT61BQ9BVS5 477 aaKnown RBP12.44□□□□□ -0.42
PTCD1-201ENST00000292478 CCDC106Q9BWC9 280 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 ABI3Q9P2A4 366 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 STOML2Q9UJZ1 356 aa12.44□□□□□ -0.42
PTCD1-201ENST00000292478 LOC100130705A0A1B0GUX0 176 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms