RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 TTC4O95801 387 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SLC16A8O95907 504 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 PDGFAP04085 211 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CAPN1P07384 714 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 RAB40ALP0C0E4 278 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 MSL3P1P0C860 447 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 GABRB3P28472 473 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 RPL21P46778 160 aaKnown RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 OR1D4P47884 311 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 PNLIPRP1P54315 467 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 DCDP81605 110 aaKnown RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 TLE1Q04724 770 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CYP2A13Q16696 494 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 NKAIN1Q4KMZ8 207 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ZC3H12BQ5HYM0 836 aaKnown RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ATG14Q6ZNE5 492 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ASB18Q6ZVZ8 466 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SYDE1Q6ZW31 735 aaPredicted RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 TRIM46Q7Z4K8 759 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 MRGPREQ86SM8 312 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 RAB43Q86YS6 212 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ZBED8Q8IZ13 594 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 OR4N4Q8N0Y3 316 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 MYO1HQ8N1T3 1032 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 FBXO36Q8NEA4 188 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF480Q8WV37 535 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 EEF1AKMT1Q8WVE0 214 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SMPDL3AQ92484 453 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 DLG3Q92796 817 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CABS1Q96KC9 395 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SLC25A23Q9BV35 468 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 EPN3Q9H201 632 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 SOX17Q9H6I2 414 aaPredicted RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 PLAC1Q9HBJ0 212 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CUEDC1Q9NWM3 386 aaPredicted RBP9.36□□□□□ -0.91
CCDC58-201ENST00000291458 CTSFQ9UBX1 484 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ADAMTS6Q9UKP5 1117 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 DHRS7Q9Y394 339 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 MRFAP1Q9Y605 127 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 ATMQ13315 3056 aa9.36□□□□□ -0.91
CCDC58-201ENST00000291458 PABPN1LA6NDY0 278 aaKnown RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 H3BMH7 237 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 HAT1O14929 419 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 DSCR3O14972 297 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 RAD51CO43502 376 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PRICKLE3O43900 615 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 MED26O95402 600 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 MPC1LP0DKB6 136 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ENO3P13929 434 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ITGAXP20702 1163 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 IMPA1P29218 277 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 RGS4P49798 205 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PGDP52209 483 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 TBPL1P62380 186 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 CBLBQ13191 982 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF460Q14592 562 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 GRM7Q14831 915 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 CRTC2Q53ET0 693 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 WASHC2DQ5SRD0 308 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 HECTD2Q5U5R9 776 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ARMC3Q5W041 872 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ICE2Q659A1 982 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PAQR3Q6TCH7 311 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF517Q6ZMY9 492 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 CCDC25Q86WR0 208 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PALM2Q8IXS6 379 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 LMNTD2Q8IXW0 634 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 OR2A1Q8NGT9 310 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 GABPB2Q8TAK5 448 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PROKR1Q8TCW9 393 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ADAMTS17Q8TE56 1095 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 C16orf45Q96MC5 204 aaPredicted RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 OLFM1Q99784 485 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 YIPF2Q9BWQ6 316 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 UNKQ9C0B0 810 aaKnown RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ATG10Q9H0Y0 220 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ING2Q9H160 280 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 SYNPO2LQ9H987 977 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 SAYSD1Q9NPB0 183 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 UTP6Q9NYH9 597 aaKnown RBP9.35□□□□□ -0.91
CCDC58-201ENST00000291458 TAS2R13Q9NYV9 303 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 TUBD1Q9UJT1 453 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 SH2B3Q9UQQ2 575 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 PSAT1Q9Y617 370 aa9.35□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF462Q96JM2 2506 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 IGKV1-8A0A0C4DH67 115 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 HYKKA2RU49 373 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 NPEPPSL1A6NEC2 478 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 ZNF839A8K0R7 811 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 H0YGG7 62 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 P2RX6O15547 441 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 ZBTB14O43829 449 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 CCNDBP1O95273 360 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 GUCA1CO95843 209 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 AHSGP02765 367 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 ERGP11308 486 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 ARSFP54793 590 aa9.34□□□□□ -0.91
CCDC58-201ENST00000291458 ARF3P61204 181 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms