RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RFTN2Q52LD8 501 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 TMEM31Q5JXX7 168 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 PM20D1Q6GTS8 502 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 AMZ2Q86W34 360 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 OR13J1Q8NGT2 312 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 FUBP1Q96AE4 644 aaKnown RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 NODALQ96S42 347 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RTP3Q9BQQ7 232 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 COPS4Q9BT78 406 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TVP23BQ9NYZ1 205 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 PDE10AQ9Y233 779 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CCL26Q9Y258 94 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RP1P56715 2156 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 A0A0J9YVX5 310 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 NPIPB15A6NHN6 443 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 A8MU76 341 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 BCAS2O75934 225 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 SAGP10523 405 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 TYRP1P17643 537 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CAPZA2P47755 286 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 NCBP2P52298 156 aaKnown RBP eCLIP4.65□□□□□ -1.664e-7■■□□□ 14
UBR1-201ENST00000290650 ATP12AP54707 1039 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 ERVK-21P61565 698 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TMEM115Q12893 351 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 SNAPC1Q16533 368 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RGS21Q2M5E4 152 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 ARMCX4Q5H9R4 360 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CEP78Q5JTW2 689 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RANBP10Q6VN20 620 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RNF130Q86XS8 419 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 GALNT13Q8IUC8 556 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TSGA13Q96PP4 275 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 IL12RB2Q99665 862 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 AIF1LQ9BQI0 150 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 DHRS4Q9BTZ2 278 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TMEM121BQ9BXQ6 578 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 CARS2Q9HA77 564 aaKnown RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 IL20RAQ9UHF4 553 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 GRXCR1A8MXD5 290 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 NME4O00746 187 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 SOD2P04179 222 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 HTR7P34969 479 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TARDBPQ13148 414 aaKnown RBP eCLIP4.65□□□□□ -1.664e-7■■□□□ 14.1
UBR1-201ENST00000290650 GPM6BQ13491 265 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 ZNF423Q2M1K9 1284 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 AMZ1Q400G9 498 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TMEM236Q5W0B7 351 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 EGFLAMQ63HQ2 1017 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 RSPO2Q6UXX9 243 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 MACC1Q6ZN28 852 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 GRHL3Q8TE85 626 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CIDECQ96AQ7 238 aaPredicted RBP4.65□□□□□ -1.66
UBR1-201ENST00000290650 C11orf49Q9H6J7 331 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 TBC1D17Q9HA65 648 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 ZNF510Q9Y2H8 683 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 Q9Y3F1 56 aa4.65□□□□□ -1.66
UBR1-201ENST00000290650 CACNB4O00305 520 aaPredicted RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 HTRA2O43464 458 aaPredicted RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 CREG1O75629 220 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 APODP05090 189 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 DHRS4L1P0CG22 281 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 RAP2AP10114 183 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 ZNF182P17025 639 aaPredicted RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 ACRV1P26436 265 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 VEGFBP49765 207 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 RAB25P57735 213 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 SFSWAPQ12872 951 aaKnown RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 GPR68Q15743 365 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 PLEKHG6Q3KR16 790 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 MINDY4Q4G0A6 757 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 INTS11Q5TA45 600 aaKnown RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 TRIQKQ629K1 86 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 WDR53Q7Z5U6 358 aaPredicted RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 TAF8Q7Z7C8 310 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 DPP10Q8N608 796 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 MCFD2Q8NI22 146 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 LCN9Q8WX39 176 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 PSKH2Q96QS6 385 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 SLC29A1Q99808 456 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 OR51V1Q9H2C8 321 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 GIN1Q9NXP7 522 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 GPRC5BQ9NZH0 403 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 EBF1Q9UH73 591 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 ZFC3H1O60293 1989 aaKnown RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 CAPN14A8MX76 684 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 PLOD3O60568 738 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 ATP6V1G1O75348 118 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 KRT75O95678 551 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 C9P02748 559 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 CDKL1Q00532 357 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 DNASE1L3Q13609 305 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 SCARB2Q14108 478 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 NNATQ16517 81 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 PIGGQ5H8A4 983 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 FOXB2Q5VYV0 432 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 CNKSR3Q6P9H4 555 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 AGTRAPQ6RW13 159 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
UBR1-201ENST00000290650 IFNLR1Q8IU57 520 aaPredicted RBP4.65□□□□□ -1.67
UBR1-201ENST00000290650 MFSD6LQ8IWD5 586 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms