RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 RNF44Q7L0R7 432 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 GPR155Q7Z3F1 870 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 MCATQ8IVS2 390 aaKnown RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 TMEM151BQ8IW70 566 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 PALM2Q8IXS6 379 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ESX1Q8N693 406 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 LSM14AQ8ND56 463 aaKnown RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 MNS1Q8NEH6 495 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 OR4K1Q8NGD4 311 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 OR56A3Q8NH54 315 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 FBF1Q8TES7 1133 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 SMPDL3AQ92484 453 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 WBP1Q96G27 269 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ELMO2Q96JJ3 720 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 CCDC138Q96M89 665 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 FOPNLQ96NB1 174 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 GBP5Q96PP8 586 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 OR2A5Q96R48 311 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 OR4K3Q96R72 315 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 RUFY1Q96T51 708 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 RBBP8Q99708 897 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 CPNE1Q99829 537 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 PLCD4Q9BRC7 762 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 SARGQ9BW04 601 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ULBP3Q9BZM4 244 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 CCDC68Q9H2F9 335 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 FAM114A2Q9NRY5 505 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 INTS7Q9NVH2 962 aaKnown RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 NSMCE4AQ9NXX6 385 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 EURLQ9NYK6 297 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 NINJ2Q9NZG7 142 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ZFATQ9P243 1243 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 STOX2Q9P2F5 926 aaPredicted RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 LNPEPQ9UIQ6 1025 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 TRMT6Q9UJA5 497 aaKnown RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 PADI1Q9ULC6 663 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 SLC39A10Q9ULF5 831 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 PLCL2Q9UPR0 1127 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 SH2B3Q9UQQ2 575 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 RELNP78509 3460 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 KCNE1BA0A087WTH5 132 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 LOC105369274A0A096LPK9 316 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 LOC102723532A0A0G2JNH3 316 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 NKX2-8O15522 239 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ZNF749O43361 778 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ZNF500O60304 480 aaPredicted RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 KDM1AO60341 852 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 SRPX2O60687 465 aaPredicted RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 CNOT3O75175 753 aaKnown RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 SCRG1O75711 98 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GCAP28676 217 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GGT5P36269 586 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GMPRP36959 345 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GP5P40197 560 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ILF2Q12905 390 aaKnown RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 SP140Q13342 867 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 EFTUD2Q15029 972 aaKnown RBP eCLIP8.78□□□□□ -12e-22■■■■■ 48.1
HMGN1-201ENST00000288344 SF1Q15637 639 aaKnown RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 PRTGQ2VWP7 1150 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 TMTC4Q5T4D3 741 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GRTP1Q5TC63 336 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ARHGAP40Q5TG30 622 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ICE2Q659A1 982 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 FRMPD2BQ6IN97 320 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 RHBDD2Q6NTF9 364 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 MRPL14Q6P1L8 145 aaKnown RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 FAM199XQ6PEV8 388 aaPredicted RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 TTC23LQ6PF05 361 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 CCDC81Q6ZN84 652 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 MBOAT1Q6ZNC8 495 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 OR4N4Q8N0Y3 316 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 CEP112Q8N8E3 955 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 EXD3Q8N9H8 876 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 PPFIBP2Q8ND30 876 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ABHD11Q8NFV4 315 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GABPB2Q8TAK5 448 aaPredicted RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 ADAMTS17Q8TE56 1095 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ISL2Q96A47 359 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 FBXL8Q96CD0 374 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 TM4SF19Q96DZ7 209 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 RNF31Q96EP0 1072 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 LINGO1Q96FE5 620 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 GPR78Q96P69 363 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 DHRS4Q9BTZ2 278 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 DERL2Q9GZP9 239 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 CAB39LQ9H9S4 337 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 PPANQ9NQ55 473 aaKnown RBP8.78□□□□□ -1
HMGN1-201ENST00000288344 SERTAD3Q9UJW9 196 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 CROTQ9UKG9 612 aa8.78□□□□□ -1
HMGN1-201ENST00000288344 C21orf140B9A014 251 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM150CB9EJG8 249 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 CDC7O00311 574 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 TAPBPO15533 448 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 PRAMEF4O60810 478 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 MT-ND3P03897 115 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 ENO2P09104 434 aaPredicted RBP8.77□□□□□ -1.01
HMGN1-201ENST00000288344 RAB40ALP0C0E4 278 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 FAM153BP0C7A2 387 aa8.77□□□□□ -1.01
HMGN1-201ENST00000288344 SLC35E2BP0CK96 405 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms