RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 MS4A4AQ96JQ5 239 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 MYOCQ99972 504 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 GJD2Q9UKL4 321 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 MAP4K5Q9Y4K4 846 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 KCNE2Q9Y6J6 123 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 TULP3O75386 442 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 GBAP04062 536 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 IFNA16P05015 189 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 ANXA4P09525 319 aaPredicted RBP12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 OXTRP30559 389 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 APLP1P51693 650 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 CDH12P55289 794 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 KCTD11Q693B1 232 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 UGT2A3Q6UWM9 527 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 FNDC11Q9BVV2 318 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 AASDHPPTQ9NRN7 309 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 CFL2Q9Y281 166 aa12.23□□□□□ -0.45
SLC6A1-201ENST00000287766 SCAMP1O15126 338 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CCL16O15467 120 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 INMTO95050 263 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 OMPP47874 163 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 KCNC1P48547 511 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 EEFSECP57772 596 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 EIF2B5Q13144 721 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PAGE3Q5JUK9 113 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 R3HCC1LQ7Z5L2 792 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 YAF2Q8IY57 180 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 OR4A15Q8NGL6 344 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 OR13J1Q8NGT2 312 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC6A15Q9H2J7 730 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 KIAA1522Q9P206 1035 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 FAAH2Q6GMR7 532 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 KDELC1Q6UW63 502 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 NPAS4Q8IUM7 802 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 TIGD4Q8IY51 512 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PIANPQ8IYJ0 282 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 BARD1Q99728 777 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 MRM3Q9HC36 420 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 SLC35C2Q9NQQ7 365 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 OSER1Q9NX31 292 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 DNAJB9Q9UBS3 223 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PTBP2Q9UKA9 531 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 BRWD1Q9NSI6 2320 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 FADS2P1A8MWK0 482 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 COCHO43405 550 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 IFNA7P01567 189 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 FABP3P05413 133 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CYP2A6P11509 494 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 TCEA1P23193 301 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 BUD31P41223 144 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CEBPGP53567 150 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 TUBB3Q13509 450 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 RFTN1Q14699 578 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 UGT8Q16880 541 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 FNDC3BQ53EP0 1204 aaKnown RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 OTUD1Q5VV17 481 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CMTM8Q8IZV2 173 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PGAP3Q96FM1 320 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PLAC1Q9HBJ0 212 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CCM2LQ9NUG4 571 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 SLAMF8Q9P0V8 285 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 PLCL2Q9UPR0 1127 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 USP22Q9UPT9 525 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 ANGPT4Q9Y264 503 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 DHRS7Q9Y394 339 aa12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 MAGED1Q9Y5V3 778 aaPredicted RBP12.22□□□□□ -0.45
SLC6A1-201ENST00000287766 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 DENRO43583 198 aaKnown RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 RPS3P23396 243 aaKnown RBP eCLIP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 MAPK8P45983 427 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 SCRN3Q0VDG4 424 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 GPR17Q13304 367 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 RAVER1Q8IY67 606 aaKnown RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 TEX47Q8TBZ9 253 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 C1orf74Q96LT6 269 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ERMAPQ96PL5 475 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ZNF347Q96SE7 839 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ASF1AQ9Y294 204 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 B4GAT1O43505 415 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 TGFBR2P37173 567 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 GPR1P46091 355 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 ARCN1P48444 511 aaKnown RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 MAN2A2P49641 1150 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 PCDH1Q08174 1060 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CMPK2Q5EBM0 449 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CCBE1Q6UXH8 406 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 RNF44Q7L0R7 432 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CYP2U1Q7Z449 544 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 STARD8Q92502 1023 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CLP1Q92989 425 aaKnown RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 TCF25Q9BQ70 676 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 BOCQ9BWV1 1114 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 BEX1Q9HBH7 125 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 CUEDC1Q9NWM3 386 aaPredicted RBP12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 C14orf119Q9NWQ9 140 aa12.21□□□□□ -0.45
SLC6A1-201ENST00000287766 GSAPA4D1B5 854 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms