RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 CAPRIN1Q14444 709 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 KRT33BQ14525 404 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SUSD1Q6UWL2 747 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 PROSER1Q86XN7 944 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SYNPOQ8N3V7 929 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SPDYE1Q8NFV5 336 aaPredicted RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 TMEM125Q96AQ2 219 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 APOLD1Q96LR9 279 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 OR52E6Q96RD3 313 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 FERD3LQ96RJ6 166 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 MTERF1Q99551 399 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 PRPF18Q99633 342 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 CGREF1Q99674 301 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SLC39A3Q9BRY0 314 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SLC6A17Q9H1V8 727 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 OSGEPL1Q9H4B0 414 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 MVB12BQ9H7P6 319 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 CMTM6Q9NX76 183 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 ACTR3BQ9P1U1 418 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 PPT2Q9UMR5 302 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 GPSM3Q9Y4H4 160 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 TCRBV21S2A2A0A5A6 115 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 GMNNO75496 209 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 NDUFV2P19404 249 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 MSX2P35548 267 aaPredicted RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 ERFP50548 548 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 HNRNPFP52597 415 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 YPEL5P62699 121 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 MRPS22P82650 360 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 LRRC74AQ0VAA2 488 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 TDGQ13569 410 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SLBPQ14493 270 aaKnown RBP eCLIP18.31■□□□□ 0.52
VBP1-201ENST00000286428 SLC2A7Q6PXP3 512 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 GPR180Q86V85 440 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 C17orf64Q86WR6 236 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SYT12Q8IV01 421 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 PQLC1Q8N2U9 271 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 HUS1BQ8NHY5 278 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 POP5Q969H6 163 aaKnown RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 ITCHQ96J02 903 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 C12orf66Q96MD2 445 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 KCTD14Q9BQ13 255 aaPredicted RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 PELI2Q9HAT8 420 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SIRT5Q9NXA8 310 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 CIDEBQ9UHD4 219 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 SUFUQ9UMX1 484 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 PCYT1BQ9Y5K3 369 aaPredicted RBP18.31■□□□□ 0.52
VBP1-201ENST00000286428 COLEC10Q9Y6Z7 277 aa18.31■□□□□ 0.52
VBP1-201ENST00000286428 CASQ2O14958 399 aaPredicted RBP18.3■□□□□ 0.52
VBP1-201ENST00000286428 ACADSP16219 412 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 SDC1P18827 310 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 HTR1EP28566 365 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 AKT2P31751 481 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 TPMTP51580 245 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 DGKEP52429 567 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 C21orf58P58505 322 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 DDX39BQ13838 428 aaKnown RBP18.3■□□□□ 0.52
VBP1-201ENST00000286428 SKIV2LQ15477 1246 aaKnown RBP18.3■□□□□ 0.52
VBP1-201ENST00000286428 ICE2Q659A1 982 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 ZNF852Q6ZMS4 543 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 FAM124AQ86V42 546 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 PTRH1Q86Y79 214 aaKnown RBP18.3■□□□□ 0.52
VBP1-201ENST00000286428 FAM156AQ8NDB6 213 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 ZNF184Q99676 751 aaPredicted RBP18.3■□□□□ 0.52
VBP1-201ENST00000286428 PCDHAC1Q9H158 963 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 KCNH6Q9H252 994 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 TM7SF3Q9NS93 570 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 AHSPQ9NZD4 102 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 AP4S1Q9Y587 144 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 HS3ST3A1Q9Y663 406 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 TRPM6Q9BX84 2022 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 CEP290O15078 2479 aa18.3■□□□□ 0.52
VBP1-201ENST00000286428 PIPSLA2A3N6 862 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 MAGEB17A8MXT2 336 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 H3BNX3 289 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 TNFRSF10CO14798 259 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 PEX1O43933 1283 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 NDUFS1P28331 727 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 SLC7A1P30825 629 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 RPL3P39023 403 aaKnown RBP18.29■□□□□ 0.52
VBP1-201ENST00000286428 DGKQP52824 942 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 LIPEQ05469 1076 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 UAP1L1Q3KQV9 507 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 SPANXN4Q5MJ08 99 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 C6orf10Q5SRN2 563 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 LCN8Q6JVE9 175 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 DLEU7Q6UYE1 221 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 TMEM132CQ8N3T6 1108 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 VPS37AQ8NEZ2 397 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 NRG4Q8WWG1 115 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 GTF2H4Q92759 462 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 NAF1Q96HR8 494 aaKnown RBP18.29■□□□□ 0.52
VBP1-201ENST00000286428 AIF1LQ9BQI0 150 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 KLHL4Q9C0H6 718 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 GEMIN8Q9NWZ8 242 aaKnown RBP18.29■□□□□ 0.52
VBP1-201ENST00000286428 DLGAP4Q9Y2H0 992 aa18.29■□□□□ 0.52
VBP1-201ENST00000286428 TCRBV3S1A0A5B6 114 aa18.28■□□□□ 0.52
VBP1-201ENST00000286428 UMPSP11172 480 aa18.28■□□□□ 0.52
VBP1-201ENST00000286428 PTX3P26022 381 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms